RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MTFR1LQ9H019 292 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZNF175Q9Y473 711 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SIGLEC16A6NMB1 481 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PPEF1O14829 653 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 TGOLN2O43493 480 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 OR5F1O95221 314 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 F10P00742 488 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GKN3PP0CG01 181 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PNPLA4P41247 253 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 BMXP51813 675 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 BAMBIQ13145 260 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 IQCCQ4KMZ1 466 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 RNF148Q8N7C7 305 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ADAMTS16Q8TE57 1224 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 NR4A3Q92570 626 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 NKD2Q969F2 451 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 MIEF1Q9NQG6 463 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZFR2Q9UPR6 939 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 PSMD9O00233 223 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MAOBP27338 520 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ASMTP46597 345 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TAF13Q15543 124 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 RNF219Q5W0B1 726 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 USP45Q70EL2 814 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TSPYL5Q86VY4 417 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 PIAS4Q8N2W9 510 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 C10orf53Q8N6V4 93 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 OR52E6Q96RD3 313 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 MRI1Q9BV20 369 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 FNDC11Q9BVV2 318 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLC38A1Q9H2H9 487 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 LRRC14BA6NHZ5 514 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 OGTO15294 1046 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CDK1P06493 297 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CXCR2P25025 360 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 YWHAQP27348 245 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 HADHBP55084 474 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 TNFAIP1Q13829 316 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 TIFABQ6ZNK6 161 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CACUL1Q86Y37 369 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PLD5Q8N7P1 536 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZNF419Q96HQ0 510 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 CTRCQ99895 268 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CPSF1Q10570 1443 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 RPN2P04844 631 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CALCRP30988 508 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 APLP1P51693 650 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GRIK2Q13002 908 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZC3H7AQ8IWR0 971 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLC44A3Q8N4M1 653 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLC13A3Q8WWT9 602 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 WASH6PQ9NQA3 447 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 CSH1P0DML2 217 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CSH2P0DML3 217 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 BMP2P12643 396 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 GLRBP48167 497 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 VLDLRP98155 873 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 USP17L2Q6R6M4 530 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PHF21BQ96EK2 531 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 COL20A1Q9P218 1284 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 A3GALT2U3KPV4 340 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 PNPP00491 289 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CASP1P29466 404 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 RPS19P39019 145 aaKnown RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZNF132P52740 706 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ERVK-25P63136 954 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 AVPI1Q5T686 147 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ZNF782Q6ZMW2 699 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ADIPOR2Q86V24 386 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 KCNMB4Q86W47 210 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ERVK-6Q9BXR3 956 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ACE2Q9BYF1 805 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLC39A8Q9C0K1 460 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ALG2Q9H553 416 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 FAM217BQ9NTX9 383 aaPredicted RBP6.57□□□□□ -1.36
UBR4-204ENST00000375254 ERVK-18Q9QC07 812 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CYP7B1O75881 506 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 LALBAP00709 142 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 EVI2BP34910 448 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 NR4A2P43354 598 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 CLCN5P51795 746 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 HERVK_113P63132 956 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 HIST2H3PS2Q5TEC6 136 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 ERMP1Q7Z2K6 904 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 VWA5B2Q8N398 1253 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 SLC41A3Q96GZ6 507 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 LGMNQ99538 433 aa6.57□□□□□ -1.36
UBR4-204ENST00000375254 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.57□□□□□ -1.36
UBR4-204ENST00000375254 A8MUI8 341 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 SMIM22K7EJ46 135 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 RASAL1O95294 804 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 TPMTP51580 245 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 LDLRAP1Q5SW96 308 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 NGLY1Q96IV0 654 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 TMEM209Q96SK2 561 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 GBA3Q9H227 469 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 WDCPQ9H6R7 721 aa6.56□□□□□ -1.36
UBR4-204ENST00000375254 CALML5Q9NZT1 146 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms