RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ZNHIT2Q9UHR6 403 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 SLC30A1Q9Y6M5 507 aa16.89■□□□□ 0.29
RXRB-201ENST00000374680 TCRBV3S1A0A5B6 114 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 KRT87PA6NCN2 255 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CCDC154A6NI56 674 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 VILLO15195 856 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CLDN11O75508 207 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CD160O95971 181 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 INHAP05111 366 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 MTPNP58546 118 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 SLC44A4Q53GD3 710 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 OTUD3Q5T2D3 398 aaPredicted RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 ARMC12Q5T9G4 340 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 PTRHD1Q6GMV3 140 aaKnown RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 MBOAT1Q6ZNC8 495 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 ZNF786Q8N393 782 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 EGFL8Q99944 293 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CIPCQ9C0C6 399 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 NSUN3Q9H649 340 aaKnown RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 PCTPQ9UKL6 214 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 ARPC2O15144 300 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 TSPAN12O95859 305 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 FGF4P08620 206 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CALRP27797 417 aaKnown RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
RXRB-201ENST00000374680 SLC26A3P40879 764 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 GSK3BP49841 420 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 LIPEQ05469 1076 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 TGFBIQ15582 683 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 GPRIN3Q6ZVF9 776 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 CLHC1Q8NHS4 586 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 SH3GL3Q99963 347 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 OAZ3Q9UMX2 235 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 GPR45Q9Y5Y3 372 aa16.88■□□□□ 0.29
RXRB-201ENST00000374680 ASPDHA6ND91 283 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 PRRG1O14668 218 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 INPPL1O15357 1258 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 HTRA2O43464 458 aaPredicted RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 CHEK2O96017 543 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 PAX3P23760 479 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 NFKB2Q00653 900 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 NR6A1Q15406 480 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ZIK1Q3SY52 487 aaPredicted RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 CXorf57Q6NSI4 855 aaKnown RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 CHST15Q7LFX5 561 aaPredicted RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 CMTR2Q8IYT2 770 aaKnown RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 APCDD1Q8J025 514 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 C17orf80Q9BSJ5 609 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ZFP14Q9HCL3 533 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 SDR39U1Q9NRG7 319 aaPredicted RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 SRRDQ9UH36 339 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ARVCFO00192 962 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 SLC22A3O75751 556 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 CR2P20023 1033 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 PCSK6P29122 969 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 CSKP41240 450 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ACADVLP49748 655 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ZXDBP98169 803 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 BLOC1S3Q6QNY0 202 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 TSPAN14Q8NG11 270 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 LKAAEAR1Q8TD35 194 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 MYLIPQ8WY64 445 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ZNF599Q96NL3 588 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 KCTD14Q9BQ13 255 aaPredicted RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 ADGRE3Q9BY15 652 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 FARSBQ9NSD9 589 aaKnown RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 INTS10Q9NVR2 710 aaKnown RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 PKP3Q9Y446 797 aa16.87■□□□□ 0.29
RXRB-201ENST00000374680 ZFC3H1O60293 1989 aaKnown RBP16.87■□□□□ 0.29
RXRB-201ENST00000374680 HMGA1P17096 107 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 SUOXP51687 545 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 HMGCS1Q01581 520 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 PLCL1Q15111 1095 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 MFN1Q8IWA4 741 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 SKA2Q8WVK7 121 aaPredicted RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 FBXL20Q96IG2 436 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 VPS50Q96JG6 964 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 CLSTN3Q9BQT9 956 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 VN1R3Q9BXE9 311 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 MRPL40Q9NQ50 206 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 GID8Q9NWU2 228 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 SUN2Q9UH99 717 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 SARDHQ9UL12 918 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 MAGED1Q9Y5V3 778 aaPredicted RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 PRSS21Q9Y6M0 314 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 GOLGA4Q13439 2230 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 A0A1B0GVM2 712 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 SYCE1LA8MT33 242 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 H7C4K7 107 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 CLDN7O95471 211 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 F11P03951 625 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 G6PDP11413 515 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms