RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 SRCP12931 536 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 STMN1P16949 149 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CPA2P48052 419 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RAB10P61026 200 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CTBP1Q13363 440 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 UBAP2LQ14157 1087 aaKnown RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 DMC1Q14565 340 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CNGA3Q16281 694 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 LIPMQ5VYY2 423 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 NAPRTQ6XQN6 538 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF783Q6ZMS7 281 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RIPOR1Q6ZS17 1223 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 KIAA0408Q6ZU52 694 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 SCUBE1Q8IWY4 988 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RBM15BQ8NDT2 890 aaKnown RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 EXOC2Q96KP1 924 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 HHIPQ96QV1 700 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 TM6SF2Q9BZW4 377 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RBM38Q9H0Z9 239 aaKnown RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 CHRDQ9H2X0 955 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 SP110Q9HB58 689 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 NT5MQ9NPB1 228 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 SLC25A13Q9UJS0 675 aa14.18□□□□□ -0.14
HMGA1-203ENST00000374116 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
HMGA1-203ENST00000374116 MYO15AQ9UKN7 3530 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 FAM95CA0A1B0GW59 222 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 GJB3O75712 270 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 SAT1P21673 171 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 NTSR1P30989 418 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 CHRNA4P43681 627 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 RPL5P46777 297 aaKnown RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 SERPINH1P50454 418 aaKnown RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 CLCN5P51795 746 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 CHN2P52757 468 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 EMP3P54852 163 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 ST8SIA6P61647 398 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 MRPS21P82921 87 aaKnown RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 MPP1Q00013 466 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 CBX3Q13185 183 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 ALG1LQ6GMV1 187 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 EPGNQ6UW88 154 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 Q6ZVU0 165 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 DHDDSQ86SQ9 333 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 DENND6AQ8IWF6 608 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 TMEM151AQ8N4L1 468 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 OR6K2Q8NGY2 324 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 STYXQ8WUJ0 223 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 PANX3Q96QZ0 392 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 OSBPL6Q9BZF3 934 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 DRC3Q9H069 523 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 ILKAPQ9H0C8 392 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 TMEM245Q9H330 911 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 SPATA6Q9NWH7 488 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-203ENST00000374116 SLC2A6Q9UGQ3 507 aa14.17□□□□□ -0.14
HMGA1-203ENST00000374116 A0A087X1B8 175 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 LOC285095A0A1B0GVY8 99 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 A0A1W2PQF6 199 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 VILLO15195 856 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 PHGDHO43175 533 aaKnown RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 PAPSS2O95340 614 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 HOXB2P14652 356 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 AVPR2P30518 371 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 SLC1A2P43004 574 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 RPS9P46781 194 aaKnown RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 KPNA2P52292 529 aaKnown RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 MAXP61244 160 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 POU4F1Q01851 419 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 DSC2Q02487 901 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 TBL3Q12788 808 aaKnown RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 DCTN2Q13561 401 aaKnown RBP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 SEPT6Q14141 434 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 PCSK7Q16549 785 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
HMGA1-203ENST00000374116 NEPROQ6NW34 567 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 UGT2A3Q6UWM9 527 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 HOMEZQ8IX15 550 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 ULK2Q8IYT8 1036 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF781Q8N8C0 355 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 SLC35B4Q969S0 331 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 ACDQ96AP0 544 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 SCYL1Q96KG9 808 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF599Q96NL3 588 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 COG4Q9H9E3 785 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 RHBDL2Q9NX52 303 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 FBXO5Q9UKT4 447 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 RAP2CQ9Y3L5 183 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 VPS13AQ96RL7 3174 aa14.16□□□□□ -0.14
HMGA1-203ENST00000374116 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ZNF821O75541 412 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-203ENST00000374116 SBK3P0C264 359 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 GKP32189 559 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 CD86P42081 329 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ACADVLP49748 655 aa14.15□□□□□ -0.14
HMGA1-203ENST00000374116 ADARP55265 1226 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms