RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TPSB2P20231 275 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ADRA1DP25100 572 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 GRIA1P42261 906 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 SARNPP82979 210 aaKnown RBP11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CDK16Q00536 496 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 GPS1Q13098 491 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 TPSAB1Q15661 275 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CDCP2Q5VXM1 449 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 PAPD7Q5XG87 772 aaKnown RBP11.85□□□□□ -0.51
HDAC8-201ENST00000373554 RBM44Q6ZP01 1051 aaKnown RBP11.85□□□□□ -0.51
HDAC8-201ENST00000373554 C17orf82Q86X59 251 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF547Q8IVP9 402 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 NXPE1Q8N323 547 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ARL14Q8N4G2 192 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 RASGEF1AQ8N9B8 481 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 PATE1Q8WXA2 126 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 GATA6Q92908 595 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 DCUN1D1Q96GG9 259 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF514Q96K75 400 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 RANBP9Q96S59 729 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 COPS8Q99627 209 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 KLC4Q9NSK0 619 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 TBC1D29Q9UFV1 150 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 RABGEF1Q9UJ41 708 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 DNAJC16Q9Y2G8 782 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 MYLKQ15746 1914 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 PDZK1P1A8MUH7 402 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 KCNJ13O60928 360 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 C1QTNF9P0C862 333 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 CA5AP35218 305 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 CLCNKAP51800 687 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 CACNG1Q06432 222 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TSTD2Q5T7W7 516 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 DET1Q7L5Y6 550 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 NLRP9Q7RTR0 991 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 SPRED1Q7Z699 444 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 AMZ2Q86W34 360 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 MARCH9Q86YJ5 346 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 Q8N9G6 341 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 AVL9Q8NBF6 648 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 SLC37A2Q8TED4 501 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 HEXDCQ8WVB3 486 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 PEX13Q92968 403 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 NXPE2Q96DL1 559 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 CDKN2AIPNLQ96HQ2 116 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-201ENST00000373554 IL22Q9GZX6 179 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 FAM96AQ9H5X1 160 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 RIMKLBQ9ULI2 386 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TCAF1Q9Y4C2 921 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 SPEGQ15772 3267 aa11.84□□□□□ -0.51
HDAC8-201ENST00000373554 TPRP12270 2363 aaKnown RBP11.83□□□□□ -0.52
HDAC8-201ENST00000373554 KIR2DS5A0A0G2JLQ3 304 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 A0A0G2JNG1 304 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 KLHL33A6NCF5 533 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 A6NCN8 305 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 OR5K4A6NMS3 321 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 D6RAR5 112 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 KIR2DS3K7RE56 304 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 EML2O95834 649 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 IDSP22304 550 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PSMA3P25788 255 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 ACRV1P26436 265 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PBLDP30039 288 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PAFAH1B1P43034 410 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 MAGEA6P43360 314 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 GPR3P46089 330 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 FASLGP48023 281 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 CTSCP53634 463 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 TERF1P54274 439 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PRAMEP78395 509 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 CCL7P80098 99 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 HHEXQ03014 270 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 KCNJ11Q14654 390 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 KIR2DS5Q14953 304 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PPP1R7Q15435 360 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 SEPT7Q16181 437 aaKnown RBP11.83□□□□□ -0.52
HDAC8-201ENST00000373554 ISXQ2M1V0 245 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 PCID2Q5JVF3 399 aa11.83□□□□□ -0.52
HDAC8-201ENST00000373554 LRRC8BQ6P9F7 803 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms