RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CDRT15Q96T59 188 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 C1QTNF3Q9BXJ4 246 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 MRPL1Q9BYD6 325 aaKnown RBP17.7■□□□□ 0.42
CTSA-204ENST00000372484 AKTIPQ9H8T0 292 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 FBRSL1Q9HCM7 1045 aaKnown RBP17.7■□□□□ 0.42
CTSA-204ENST00000372484 SPHK2Q9NRA0 654 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 NMRK1Q9NWW6 199 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 SLCO3A1Q9UIG8 710 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 TMCO1Q9UM00 188 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 PTGDR2Q9Y5Y4 395 aa17.7■□□□□ 0.42
CTSA-204ENST00000372484 TRBV5-4A0A0C4DH59 114 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 NVLO15381 856 aaKnown RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 EPCAMP16422 314 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 ITGB6P18564 788 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 IRS1P35568 1242 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 NTHL1P78549 312 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 CCNIQ14094 377 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 CARD16Q5EG05 197 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 LYPLAL1Q5VWZ2 237 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 AAGABQ6PD74 315 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 TPRG1Q6ZUI0 275 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 FRA10AC1Q70Z53 315 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 CBARPQ8N350 705 aaPredicted RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 SLC26A7Q8TE54 656 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PDLIM5Q96HC4 596 aaKnown RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 CPEB1Q9BZB8 566 aaKnown RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 CEP44Q9C0F1 390 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PCTPQ9UKL6 214 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PACSIN3Q9UKS6 424 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 XYLBO75191 536 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 BAG2O95816 211 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 MLYCDO95822 493 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 CHRM1P11229 460 aaPredicted RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 STX5Q13190 355 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PTK2BQ14289 1009 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 MMEL1Q495T6 779 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 GPR33Q49SQ1 333 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 LY6G5CQ5SRR4 150 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 LRRC66Q68CR7 880 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 HIPK4Q8NE63 616 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 ZNF483Q8TF39 744 aaPredicted RBP17.69■□□□□ 0.42
CTSA-204ENST00000372484 PYDC1Q8WXC3 89 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 ESAMQ96AP7 390 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 HGH1Q9BTY7 390 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 S100A14Q9HCY8 104 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 TBC1D14Q9P2M4 693 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 PRSS21Q9Y6M0 314 aa17.69■□□□□ 0.42
CTSA-204ENST00000372484 LINC01553A4QN01 128 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 SLC25A14O95258 325 aaPredicted RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 TRIM16O95361 564 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 UGT2B4P06133 528 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 HOXA9P31269 272 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 STX1BP61266 288 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 RBBP7Q16576 425 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ZNF697Q5TEC3 545 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ELMSAN1Q6PJG2 1045 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 Q6ZVU0 165 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 SPRED2Q7Z698 418 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 GPR26Q8NDV2 337 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 DNAJC9Q8WXX5 260 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 NAF1Q96HR8 494 aaKnown RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 TUBB1Q9H4B7 451 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 GIPC1O14908 333 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 LINC00032P0C843 101 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 RGS4P49798 205 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ZNF77Q15935 545 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 PIGGQ5H8A4 983 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 GRASPQ7Z6J2 395 aaPredicted RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 ADAMTSL2Q86TH1 951 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 NXPE1Q8N323 547 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ZNF557Q8N988 423 aaPredicted RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 SNX31Q8N9S9 440 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 LEMD2Q8NC56 503 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 PPFIBP2Q8ND30 876 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 PHOSPHO2Q8TCD6 241 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 TUBGCP3Q96CW5 907 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ZSWIM3Q96MP5 696 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 ZNF641Q96N77 438 aaPredicted RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 NUDT4Q9NZJ9 180 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 EIF2B4Q9UI10 523 aaKnown RBP17.68■□□□□ 0.42
CTSA-204ENST00000372484 BTRCQ9Y297 605 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 PPIL1Q9Y3C6 166 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 RWDD3Q9Y3V2 267 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 HCFC2Q9Y5Z7 792 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 WNT6Q9Y6F9 365 aa17.68■□□□□ 0.42
CTSA-204ENST00000372484 E2F3O00716 465 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 ESRRBO95718 433 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 SNRPB2P08579 225 aaKnown RBP17.67■□□□□ 0.42
CTSA-204ENST00000372484 HSPA8P11142 646 aaKnown RBP17.67■□□□□ 0.42
CTSA-204ENST00000372484 PRDX3P30048 256 aaKnown RBP17.67■□□□□ 0.42
CTSA-204ENST00000372484 ATP4BP51164 291 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 THOP1P52888 689 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 PKNOX1P55347 436 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 PTSQ03393 145 aa17.67■□□□□ 0.42
CTSA-204ENST00000372484 UBE3AQ05086 875 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms