RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 RANBP10Q6VN20 620 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 ZNF534Q76KX8 674 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 RD3Q7Z3Z2 195 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 TBC1D1Q86TI0 1168 aaPredicted RBP9.5□□□□□ -0.89
TMEM254-201ENST00000372273 FITM2Q8N6M3 262 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 GPR26Q8NDV2 337 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 CEP76Q8TAP6 659 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 KLHL29Q96CT2 875 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 KLHDC7BQ96G42 594 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 LRRC37BQ96QE4 947 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 EBNA1BP2Q99848 306 aaKnown RBP9.5□□□□□ -0.89
TMEM254-201ENST00000372273 TRIM56Q9BRZ2 755 aaKnown RBP9.5□□□□□ -0.89
TMEM254-201ENST00000372273 MANSC1Q9H8J5 431 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 SLCO1B3Q9NPD5 702 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 PLXNA2O75051 1894 aa9.5□□□□□ -0.89
TMEM254-201ENST00000372273 TMEM202A6NGA9 273 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TRIM49D1C9J1S8 452 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 FPGTO14772 594 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 HGSO14964 777 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SOD1P00441 154 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 FUCA1P04066 466 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 PYGBP11216 843 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MAGEA3P43357 314 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 NCALDP61601 193 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CRADDP78560 199 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SLC18A2Q05940 514 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MPP3Q13368 585 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SHBQ15464 509 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SMAD1Q15797 465 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 PARP6Q2NL67 630 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 STPG1Q5TH74 334 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ITPRIPL1Q6GPH6 555 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CASC4Q6P4E1 433 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 UNC5AQ6ZN44 842 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TECPR1Q7Z6L1 1165 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ABI3BPQ7Z7G0 1075 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MFSD2AQ8NA29 543 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 OR52K1Q8NGK4 314 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ZNF398Q8TD17 642 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CDKL2Q92772 493 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TSACCQ96A04 125 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 NUS1Q96E22 293 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 THOC1Q96FV9 657 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 RIOK2Q9BVS4 552 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 EIF2B3Q9NR50 452 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 UCKL1Q9NWZ5 548 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SLC17A7Q9P2U7 560 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SUSD2Q9UGT4 822 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 DMTF1Q9Y222 760 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 DCDC2BA2VCK2 349 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MTX2O75431 263 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ANXA9O76027 345 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CYP2A6P11509 494 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MYF5P13349 255 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 NQO1P15559 274 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CNTFP26441 200 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 HOXD12P35452 270 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 CTSKP43235 329 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 POLD2P49005 469 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 NXPH1P58417 271 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 PFN3P60673 137 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ELF3P78545 371 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TMPRSS15P98073 1019 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 MSLNQ13421 630 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 FZD2Q14332 565 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 POU6F1Q14863 301 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 RAET1GQ6H3X3 334 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 OTOAQ7RTW8 1153 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 RBFAQ8N0V3 343 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 AP2M1Q96CW1 435 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ERP27Q96DN0 273 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 STAMBPL1Q96FJ0 436 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 DTD2Q96FN9 168 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 SIGLEC10Q96LC7 697 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TBL1YQ9BQ87 522 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TSSK1BQ9BXA7 367 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TRIM55Q9BYV6 548 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 GPR63Q9BZJ6 419 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 DNAJC28Q9NX36 388 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 BTBD3Q9Y2F9 522 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 TMEM98Q9Y2Y6 226 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 AAR2Q9Y312 384 aaKnown RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 ZNF711Q9Y462 761 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 PRKAB1Q9Y478 270 aa9.49□□□□□ -0.89
TMEM254-201ENST00000372273 PCYT1BQ9Y5K3 369 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-201ENST00000372273 NCOR2Q9Y618 2525 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 FADS2P1A8MWK0 482 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 CHUKO15111 745 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 MGRN1O60291 552 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 C1QAP02745 245 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 CELA2BP08218 269 aaPredicted RBP9.48□□□□□ -0.89
TMEM254-201ENST00000372273 BPIP17213 487 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 KCNA4P22459 653 aa9.48□□□□□ -0.89
TMEM254-201ENST00000372273 SPINT3P49223 89 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms