RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LYPLAL1Q5VWZ2 237 aa15.16■□□□□ 0.02
COL5A1-201ENST00000371817 LIN37Q96GY3 246 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
COL5A1-201ENST00000371817 VNN2O95498 520 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 C9orf43Q8TAL5 461 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 FUZQ9BT04 418 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TRPS1Q9UHF7 1281 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 NOP16Q9Y3C1 178 aaKnown RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 H7C4K7 107 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 OR2B3O76000 313 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 C8BP07358 591 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 IL1R1P14778 569 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 PTPN6P29350 595 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 IQCCQ4KMZ1 466 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 BSNDQ8WZ55 320 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 KXD1Q9BQD3 176 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 BRD7Q9NPI1 651 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 KCNU1A8MYU2 1149 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 AIPO00170 330 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 SULT1B1O43704 296 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 CD72P21854 359 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 S100A10P60903 97 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 E2F1Q01094 437 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 GCNT1Q02742 428 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ALG10Q5BKT4 473 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 AADACL2Q6P093 401 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 SV2AQ7L0J3 742 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 OR10H5Q8NGA6 315 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ZSWIM3Q96MP5 696 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 WDR6Q9NNW5 1121 aaKnown RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TTC34A8MYJ7 566 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 MT-ND1P03886 318 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 UROSP10746 265 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TMEM44Q2T9K0 475 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 SCIMPQ6UWF3 145 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 CUZD1Q86UP6 607 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 APOBEC3FQ8IUX4 373 aaKnown RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TCF25Q9BQ70 676 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TRPV2Q9Y5S1 764 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 FAM149AA5PLN7 773 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TVP23AA6NH52 213 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 DCKP27707 260 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 OR8K3Q8NH51 312 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 APLP1P51693 650 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ATXN1P54253 815 aaKnown RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ATAD3CQ5T2N8 411 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ISM1B1AKI9 464 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ENTPD6O75354 484 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 MECP2P51608 486 aaKnown RBP15.15■□□□□ 0.02
COL5A1-201ENST00000371817 BATFQ16520 125 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 PAMR1Q6UXH9 720 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 PPCDCQ96CD2 204 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 TBX22Q9Y458 520 aa15.15■□□□□ 0.02
COL5A1-201ENST00000371817 ERVK-7P63135 1459 aa15.14■□□□□ 0.02
COL5A1-201ENST00000371817 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 IGKV5-2P06315 115 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 CKMP06732 381 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SP140Q13342 867 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 KRBOX4Q5JUW0 171 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 RFWD3Q6PCD5 774 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SHQ1Q6PI26 577 aaKnown RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 DET1Q7L5Y6 550 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 C3orf58Q8NDZ4 430 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 CADM1Q9BY67 442 aaKnown RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 TMEM184CQ9NVA4 438 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PCDHGB6Q9Y5F9 930 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 CYP2A6P11509 494 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SLC7A1P30825 629 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 FMO3P31513 532 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 MTFR2Q6P444 385 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 ACBD4Q8NC06 268 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 GLT1D1Q96MS3 346 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 MAFKO60675 156 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 MBL2P11226 248 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 WDR45BQ5MNZ6 344 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 DENND1CQ8IV53 801 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 AUTS2Q8WXX7 1259 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 WACQ9BTA9 647 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 ATP6V0D1P61421 351 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 NFE2L1Q14494 772 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 IRAK1BP1Q5VVH5 260 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 VSTM1Q6UX27 236 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 UQCC2Q9BRT2 126 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 EIF5A2Q9GZV4 153 aaKnown RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 GAKO14976 1311 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 A8MV72 311 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PIAS1O75925 651 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PCDH8O95206 1070 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PENKP01210 267 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-201ENST00000371817 IFNW1P05000 195 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 PIK3CBP42338 1070 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SBK1Q52WX2 424 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 AKR1C8PQ5T2L2 129 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 GPRC6AQ5T6X5 926 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 ZYG11AQ6WRX3 759 aa15.14■□□□□ 0.01
COL5A1-201ENST00000371817 ANKRD52Q8NB46 1076 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms