RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 PTPRBP23467 1997 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 TRBV5-4A0A0C4DH59 114 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 NOBOXO60393 691 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 EML2O95834 649 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACP1P24666 158 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 NMBRP28336 390 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 AKT1P31749 480 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 FOXN2P32314 431 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 NPY2RP49146 381 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 SKIDA1Q1XH10 827 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 IZUMO3Q5VZ72 239 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 ERMP1Q7Z2K6 904 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 PPIL6Q8IXY8 311 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 AGGF1Q8N302 714 aaeCLIP14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 NXPE1Q8N323 547 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 MCUQ8NE86 351 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 PATE1Q8WXA2 126 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 SCG3Q8WXD2 468 aaKnown RBP14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 HDAC10Q969S8 669 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 RUNDC3BQ96NL0 473 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 DPEP2Q9H4A9 486 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 RIMKLBQ9ULI2 386 aa14.88□□□□□ -0.03
SMPDL3A-201ENST00000368440 OR2AG2A6NM03 316 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 ADRB1P08588 477 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 CLDN6P56747 220 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 CES3Q6UWW8 571 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 DET1Q7L5Y6 550 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 C11orf96Q7Z7L8 435 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 LRRTM4Q86VH4 590 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 TRAPPC5Q8IUR0 188 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 ARL10Q8N8L6 244 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 GPR156Q8NFN8 814 aa14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 APOBEC2Q9Y235 224 aaKnown RBP14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 COL27A1Q8IZC6 1860 aaPredicted RBP14.87□□□□□ -0.03
SMPDL3A-201ENST00000368440 SPTBN2O15020 2390 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 GPR89AB7ZAQ6 455 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 AP3B1O00203 1094 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 CASC3O15234 703 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SGTAO43765 313 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 RFPL3O75679 317 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 GOT2P00505 430 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 GPR89BP0CG08 455 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 MSH3P20585 1137 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 MAGEA3P43357 314 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 CACNG1Q06432 222 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 FOXC1Q12948 553 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 GTF2H3Q13889 308 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 LRP8Q14114 963 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 DHX34Q14147 1143 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 NR0B2Q15466 257 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 PERM1Q5SV97 790 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 OGFOD3Q6PK18 319 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 DHRS13Q6UX07 377 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SYDE1Q6ZW31 735 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SERPINA9Q86WD7 417 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 NAGSQ8N159 534 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 BEND7Q8N7W2 519 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZDHHC1Q8WTX9 485 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ULK4Q96C45 1275 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TTC25Q96NG3 672 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TRIM31Q9BZY9 425 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 KLC4Q9NSK0 619 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TREX1Q9NSU2 369 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 CPED1A4D0V7 1026 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 EME2A4GXA9 379 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 KMOO15229 486 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 MLNP12872 115 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZNF7P17097 686 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACRV1P26436 265 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 MAZP56270 477 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 LAMB3Q13751 1172 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SEMA3AQ14563 771 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SMAD1Q15797 465 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 DBN1Q16643 649 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 INSCQ1MX18 579 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 GPR33Q49SQ1 333 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TMEM220Q6QAJ8 160 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 NLRP9Q7RTR0 991 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TAS2R42Q7RTR8 314 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 EFL1Q7Z2Z2 1120 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZNF572Q7Z3I7 529 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 CHCHD4Q8N4Q1 142 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 IFI44Q8TCB0 444 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 MFSD3Q96ES6 412 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SGF29Q96ES7 293 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 KIFC1Q9BW19 673 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZCCHC2Q9C0B9 1178 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 XAB2Q9HCS7 855 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 TBC1D29Q9UFV1 150 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 PADI4Q9UM07 663 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 SOX13Q9UN79 622 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 DNAJC16Q9Y2G8 782 aa14.86□□□□□ -0.03
SMPDL3A-201ENST00000368440 IGLV3-16A0A075B6K0 115 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 PRR19A6NJB7 356 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 RAD51CO43502 376 aa14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 HYAL3O43820 417 aaPredicted RBP14.85□□□□□ -0.03
SMPDL3A-201ENST00000368440 BANF1O75531 89 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms