RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 STYXQ8WUJ0 223 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 PATE1Q8WXA2 126 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 CDKN2AIPNLQ96HQ2 116 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ZNF514Q96K75 400 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 TIMM29Q9BSF4 260 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 RAB6BQ9NRW1 208 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 TBC1D29Q9UFV1 150 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 SLC23A2Q9UGH3 650 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 FKBPLQ9UIM3 349 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ZMIZ1Q9ULJ6 1067 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 TTC7AQ9ULT0 858 aaPredicted RBP9.72□□□□□ -0.85
CD48-202ENST00000368046 ENTPD2Q9Y5L3 495 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 ASPMQ8IZT6 3477 aa9.72□□□□□ -0.85
CD48-202ENST00000368046 CHD8Q9HCK8 2581 aa9.71□□□□□ -0.85
CD48-202ENST00000368046 KIR2DS5A0A0G2JLQ3 304 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 A0A0G2JNG1 304 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 H7C0S8 307 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 KIR2DS3K7RE56 304 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 TAF4O00268 1085 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 CASC3O15234 703 aaKnown RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 SNX2O60749 519 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 POP7O75817 140 aaKnown RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 PRAMEF1O95521 474 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 EML2O95834 649 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 RPLP0P05388 317 aaKnown RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 ZSCAN5DPP0CG00 497 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 F3P13726 295 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SLC2A4P14672 509 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 VCLP18206 1134 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 XRCC1P18887 633 aaPredicted RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 MSH3P20585 1137 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 IDSP22304 550 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 PSMA3P25788 255 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ALDH4A1P30038 563 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 CA5AP35218 305 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 FASLGP48023 281 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 LSSP48449 732 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 OR1D5P58170 312 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 TMPRSS15P98073 1019 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 NFATC2Q13469 925 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 LAMB3Q13751 1172 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 KIR2DS5Q14953 304 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 CLPPQ16740 277 aaPredicted RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 INSCQ1MX18 579 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SKIDA1Q1XH10 827 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 GPR33Q49SQ1 333 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 GPRC6AQ5T6X5 926 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ABRAXAS1Q6UWZ7 409 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ZNF438Q7Z4V0 828 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 C11orf96Q7Z7L8 435 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 PRUNE1Q86TP1 453 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SLC9B2Q86UD5 537 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 PIM3Q86V86 326 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 PROSER1Q86XN7 944 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 CCNJLQ8IV13 435 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ZNF547Q8IVP9 402 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 RASGEF1AQ8N9B8 481 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 GLIS1Q8NBF1 620 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 OR52K1Q8NGK4 314 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 HEXDCQ8WVB3 486 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 SH3KBP1Q96B97 665 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 NXPE2Q96DL1 559 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 NAP1L3Q99457 506 aaPredicted RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 ZCCHC2Q9C0B9 1178 aaKnown RBP9.71□□□□□ -0.86
CD48-202ENST00000368046 PRDM8Q9NQV8 689 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SMOXQ9NWM0 555 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 KCNK6Q9Y257 313 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 SLC30A1Q9Y6M5 507 aa9.71□□□□□ -0.86
CD48-202ENST00000368046 ACACBO00763 2458 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 A6NCN8 305 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 MROH6A6NGR9 719 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 PRR19A6NJB7 356 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 AP3B1O00203 1094 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 CES2O00748 559 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 CPNE6O95741 557 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 APRTP07741 180 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 ADRA1DP25100 572 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 CD1CP29017 333 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 MC4RP32245 332 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 GRIA1P42261 906 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 NPY2RP49146 381 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 ZNF140P52738 457 aaPredicted RBP9.7□□□□□ -0.86
CD48-202ENST00000368046 INHBCP55103 352 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
CD48-202ENST00000368046 POU6F1Q14863 301 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
CD48-202ENST00000368046 CRTC3Q6UUV7 619 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 WASH2PQ6VEQ5 465 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 PPP1R21Q6ZMI0 780 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 USP53Q70EK8 1073 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 AMZ2Q86W34 360 aa9.7□□□□□ -0.86
CD48-202ENST00000368046 TRAPPC5Q8IUR0 188 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms