RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 SH3BGRP55822 239 aaPredicted RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 IL9RQ01113 521 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 SLC10A6Q3KNW5 377 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 COBLL1Q53SF7 1204 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 WSCD1Q658N2 575 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 SYCE2Q6PIF2 218 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 FRMD5Q7Z6J6 570 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 GPR65Q8IYL9 337 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 TRPV3Q8NET8 790 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 RFWD2Q8NHY2 731 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 TRMT2BQ96GJ1 504 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 GOLPH3Q9H4A6 298 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 SCOCQ9UIL1 159 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 SOX13Q9UN79 622 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 NFE2L3Q9Y4A8 694 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 R4GN57 208 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 BCL9O00512 1426 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 MTMR11A4FU01 709 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 LRRC30A6NM36 301 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 H3BQF6 201 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 M0R129 80 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 SLC7A4O43246 635 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 WBP4O75554 376 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 CPNE6O95741 557 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 NDST3O95803 873 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 GALTP07902 379 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 GSTM1P09488 218 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CHRNB2P17787 502 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 KIR3DL1P43629 444 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PXNP49023 591 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 EIF3EP60228 445 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 PTENP60484 403 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 GABREP78334 506 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 POU5F1Q01860 360 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 GSTM4Q03013 218 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 NFATC3Q12968 1075 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ZBTB17Q13105 803 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 FLOT2Q14254 428 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 SLC39A14Q15043 492 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 MAPKAPK3Q16644 382 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 RALGPS1Q5JS13 557 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TREML2Q5T2D2 321 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 RAP1GAP2Q684P5 730 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ZNF720Q7Z2F6 126 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CBWD2Q8IUF1 395 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CMTM4Q8IZR5 234 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ADAMTS15Q8TE58 950 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 NINJ1Q92982 152 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PTCD3Q96EY7 689 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 LINGO1Q96FE5 620 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 BMFQ96LC9 184 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 SLC12A9Q9BXP2 914 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 JMJD4Q9H9V9 463 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TCFL5Q9UL49 500 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 NDRG4Q9ULP0 352 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 A0A0A6YYC8 382 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 TEX13CA0A0J9YWL9 993 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 STMND1H3BQB6 276 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 I3L1I5 382 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 COPEO14579 308 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PIP5K1BO14986 540 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TCEA3O75764 348 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 KRT75O95678 551 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 OXSR1O95747 527 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 ZNF30P17039 623 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 MAGEA6P43360 314 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 EMP2P54851 167 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 DEFB109BQ30KR1 87 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CRY2Q49AN0 593 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 GRHL2Q6ISB3 625 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 FSTL4Q6MZW2 842 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 C6orf15Q6UXA7 325 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 NLRC3Q7RTR2 1065 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PTOV1Q86YD1 416 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 BCORP1Q8N888 145 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PCYOX1LQ8NBM8 494 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 RPLP0P6Q8NHW5 317 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 RMDN2Q96LZ7 410 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 C16orf70Q9BSU1 422 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ZNF395Q9H8N7 513 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 ENY2Q9NPA8 101 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CUEDC1Q9NWM3 386 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 RGS17Q9UGC6 210 aaPredicted RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 PHF11Q9UIL8 331 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ADCY10Q96PN6 1610 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 CHD1O14646 1710 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 PIGBOS1A0A0B4J2F0 54 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 KIR2DS5A0A0G2JLQ3 304 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 A0A0G2JNG1 304 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TMEM191CA6NGB0 347 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 SAC3D1A6NKF1 404 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 ERI2A8K979 691 aaKnown RBP4.06□□□□□ -1.76
USH2A-202ENST00000366942 KIR2DS3K7RE56 304 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 DCLK1O15075 740 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TRIM24O15164 1050 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 TSPAN9O75954 239 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 MT-CO3P00414 261 aa4.06□□□□□ -1.76
USH2A-202ENST00000366942 IFNGP01579 166 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms