RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZNF280AP59817 542 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLC9B1Q4ZJI4 515 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 OR4K2Q8NGD2 314 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 TAMM41Q96BW9 452 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 KIFC1Q9BW19 673 aa11.71□□□□□ -0.54
CDC42BPA-202ENST00000366764 NOS3P29474 1203 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 GSSP48637 474 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SRSF11Q05519 484 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 RAB43Q86YS6 212 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 PIH1D2Q8WWB5 315 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF696Q9H7X3 374 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 C22orf31O95567 290 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 PLCL1Q15111 1095 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF829Q3KNS6 432 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 COQ5Q5HYK3 327 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CAND1Q86VP6 1230 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 PCM1Q15154 2024 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CXorf49A8MYA2 514 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRBC1P01850 177 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 FABP3P05413 133 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 GNAZP19086 355 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 GALNT2Q10471 571 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF57Q68EA5 555 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ASZ1Q8WWH4 475 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLC13A3Q8WWT9 602 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 LRRC58Q96CX6 371 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 C1QTNF7Q9BXJ2 289 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 HSPA14Q0VDF9 509 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 RAP1GAP2Q684P5 730 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SULT1C3Q6IMI6 304 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 A0A1W2PP18 115 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CLDN5O00501 218 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 KERAO60938 352 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CLPXO76031 633 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CKBP12277 381 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 AP1S1P61966 158 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 DAG1Q14118 895 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TAF1AQ15573 450 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 MOGQ16653 247 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 HDDC2Q7Z4H3 204 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLITRK2Q9H156 845 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF232Q9UNY5 417 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SCN7AQ01118 1682 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 NRAPQ86VF7 1730 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ERN1O75460 977 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 LINC00854A0A1B0GVQ3 168 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ARPC2O15144 300 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 NCBP2-AS2Q69YL0 99 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 KRT74Q7RTS7 529 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF347Q96SE7 839 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SYT11Q9BT88 431 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 RETREG1Q9H6L5 497 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TCRBV7S3A2A0A539 114 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SYN3O14994 580 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 MAPK10P53779 464 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPIBQ01892 262 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 TUBA3EQ6PEY2 450 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 OR5K1Q8NHB7 308 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 ITFG2Q969R8 447 aa11.7□□□□□ -0.54
CDC42BPA-202ENST00000366764 PWP1Q13610 501 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 IL23RQ5VWK5 629 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 CLEC6AQ6EIG7 209 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 HACD2Q6Y1H2 254 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRPV3Q8NET8 790 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 GPATCH1Q9BRR8 931 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 CCDC106Q9BWC9 280 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 STRA6Q9BX79 667 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 SDC2P34741 201 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 CBX3Q13185 183 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZFP69Q49AA0 526 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 XKR6Q5GH73 641 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 PLET1Q6UQ28 207 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 PPP1R16AQ96I34 528 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 DNAJC11Q9NVH1 559 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 GPC6Q9Y625 555 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A9O60656 530 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 SNNO75324 88 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A6P19224 532 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A1P22309 533 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A4P22310 534 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A3P35503 534 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A5P35504 534 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 STX4Q12846 297 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 COPS5Q92905 334 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 MYO19Q96H55 970 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 DYRK3O43781 588 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 EPOP01588 193 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 ECT2LQ008S8 904 aa11.69□□□□□ -0.54
CDC42BPA-202ENST00000366764 CYP4F3Q08477 520 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms