RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 UNC5BQ8IZJ1 945 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 APCDD1Q8J025 514 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 GANCQ8TET4 914 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CCDC97Q96F63 343 aaPredicted RBP11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 MYO19Q96H55 970 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 TRIB3Q96RU7 358 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 NOD2Q9HC29 1040 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 PPANQ9NQ55 473 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 TREX1Q9NSU2 369 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 ABCB8Q9NUT2 735 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 ZFATQ9P243 1243 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 LHX3Q9UBR4 397 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 RIMKLBQ9ULI2 386 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 ACTL7AQ9Y615 435 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 LRBAP50851 2863 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CRYBG3Q68DQ2 2970 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 MROH6A6NGR9 719 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 LRRC72A6NJI9 287 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 FOXO6A8MYZ6 492 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TRIM49D1C9J1S8 452 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TRIM38O00635 465 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 UGT1A9O60656 530 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 ERVK-10P10266 1014 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 KRT4P19013 534 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 CA4P22748 312 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 CCNFP41002 786 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 SCNN1BP51168 640 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 CSE1LP55060 971 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 DAB2P98082 770 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 MPP2Q14168 576 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 LINC00303Q3SY05 128 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TSTD2Q5T7W7 516 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 IGF2-ASQ6U949 168 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 KCNMB4Q86W47 210 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 CNTN4Q8IWV2 1026 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC25A41Q8N5S1 370 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 BANPQ8N9N5 519 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 OR2T34Q8NGX1 318 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 DENND1AQ8TEH3 1009 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 SERAC1Q96JX3 654 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 RSPH9Q9H1X1 276 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 EPN3Q9H201 632 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 UGT1A7Q9HAW7 530 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 UGT1A10Q9HAW8 530 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 UGT1A8Q9HAW9 530 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 C20orf96Q9NUD7 363 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 MKS1Q9NXB0 559 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 FBXL12Q9NXK8 326 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 TXNDC16Q9P2K2 825 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 INTS6Q9UL03 887 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 SCML1Q9UN30 329 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 SATB2Q9UPW6 733 aa11.18□□□□□ -0.62
CSNK1E-202ENST00000366216 UNC13CQ8NB66 2214 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 HMX2A2RU54 273 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 PMS2P1A4D2B8 440 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 TM9SF1O15321 606 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 RFPL1O75677 317 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ZWINTO95229 277 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 RBMS1P29558 406 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 CD70P32970 193 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ARCN1P48444 511 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 CCR5P51681 352 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 RHOAP61586 193 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 AP1S1P61966 158 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 SULT2A1Q06520 285 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 HSP90AA5PQ58FG0 334 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 PITRM1Q5JRX3 1037 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 TTC19Q6DKK2 380 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ESRP1Q6NXG1 681 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 LINGO4Q6UY18 593 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 KDELC2Q7Z4H8 507 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 C4orf33Q8N1A6 199 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 BRSK1Q8TDC3 778 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ACMSDQ8TDX5 336 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 WFIKKN2Q8TEU8 576 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ISL2Q96A47 359 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ISG20Q96AZ6 181 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 NSMCE3Q96MG7 304 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ZNF778Q96MU6 729 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 RBBP8Q99708 897 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 MCMBPQ9BTE3 642 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
CSNK1E-202ENST00000366216 ABCA12Q86UK0 2595 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 A0A1W2PP55 124 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 GMNCA6NCL1 334 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CASC3O15234 703 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC7A4O43246 635 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 LDB2O43679 373 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SDC3O75056 442 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SPAG7O75391 227 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms