RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 KIAA0408Q6ZU52 694 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 KCNMB4Q86W47 210 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CILP2Q8IUL8 1156 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 HID1Q8IV36 788 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CNTN4Q8IWV2 1026 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 PALM2Q8IXS6 379 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 PIANPQ8IYJ0 282 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 DCLK2Q8N568 766 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 SAP25Q8TEE9 199 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 UBXN4Q92575 508 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 TSACCQ96A04 125 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 FAM122AQ96E09 287 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CERS2Q96G23 380 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 LINC00615Q96LM1 132 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 WDR83Q9BRX9 315 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 VPS37BQ9H9H4 285 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CARS2Q9HA77 564 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CYP4F12Q9HCS2 524 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 C20orf96Q9NUD7 363 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 MOCS1Q9NZB8 636 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 KLF15Q9UIH9 416 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 CHMP2BQ9UQN3 213 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 MYLKQ15746 1914 aa13.66□□□□□ -0.22
NSMCE1-201ENST00000361439 RALGAPA1Q6GYQ0 2036 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 OR51F1A6NGY5 319 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 TPP1O14773 563 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 GPR39O43194 453 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 AQP9O43315 295 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 BANF1O75531 89 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 FUCA1P04066 466 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 CTSEP14091 401 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 VCLP18206 1134 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 PLA2G5P39877 138 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 POLD2P49005 469 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 SHBQ15464 509 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 INAVAQ3KP66 663 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 BCL7AQ4VC05 210 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 DOK6Q6PKX4 331 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 GKN2Q86XP6 184 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 PDXPQ96GD0 296 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 OR2M4Q96R27 311 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 DUSP23Q9BVJ7 150 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 NSMCE4AQ9NXX6 385 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 PNMA8BQ9ULN7 279 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
NSMCE1-201ENST00000361439 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 C17orf113A0A1B0GUU1 675 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 LMO7DNF2Z398 122 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 H3BMM5 538 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 SCAMP1O15126 338 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 FLRT2O43155 660 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 MTX2O75431 263 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 SDHBP21912 280 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.231e-7■■■■■ 50.6
NSMCE1-201ENST00000361439 DGKAP23743 735 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CA5AP35218 305 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 GNPDA1P46926 289 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 PRLHRP49683 370 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 B4GALNT1Q00973 533 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 FASTKD3Q14CZ7 662 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 KHDC1Q4VXA5 237 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 PRRT3Q5FWE3 981 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 WDR93Q6P2C0 686 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 C3orf62Q6ZUJ4 267 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CCDC25Q86WR0 208 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 RASGEF1AQ8N9B8 481 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF548Q8NEK5 533 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 NETO1Q8TDF5 533 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CDKL2Q92772 493 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CFAP36Q96G28 342 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 TRIM56Q9BRZ2 755 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 LRRC61Q9BV99 259 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CLPBQ9H078 707 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 FAM96AQ9H5X1 160 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 PLAC1Q9HBJ0 212 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 MRPL40Q9NQ50 206 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 FSCN3Q9NQT6 498 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNHIT2Q9UHR6 403 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 MOSPD1Q9UJG1 213 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 BPTFQ12830 3046 aa13.64□□□□□ -0.23
NSMCE1-201ENST00000361439 CABIN1Q9Y6J0 2220 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms