RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TWIST2Q8WVJ9 160 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 OR2AG2A6NM03 316 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 SLC28A2O43868 658 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 ZNF572Q7Z3I7 529 aaPredicted RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 TSSK3Q96PN8 268 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TWNKQ96RR1 684 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 TFB2MQ9H5Q4 396 aaKnown RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 RERGLQ9H628 205 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
LDB3-202ENST00000361373 C15orf41Q9Y2V0 281 aa13.36□□□□□ -0.27
LDB3-202ENST00000361373 CHURC1-FNTBB4DL54 471 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 IDH2P48735 452 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 UBXN11Q5T124 520 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 PARGQ86W56 976 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 TTC29Q8NA56 475 aaPredicted RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 C19orf18Q8NEA5 215 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 OR2AP1Q8NGE2 309 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 RPL10LQ96L21 214 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 MIPEPQ99797 713 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 ITM2CQ9NQX7 267 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 RHPN2P1A8MT19 583 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 GNSP15586 552 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 CDH3P22223 829 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 MPSTP25325 297 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 SLC7A2P52569 658 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 XIAPP98170 497 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 TAF13Q15543 124 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 SPESP1Q6UW49 350 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 AMZ2Q86W34 360 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 GJD3Q8N144 294 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 MAGEE2Q8TD90 523 aaPredicted RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 NOL11Q9H8H0 719 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 ADAMTS3O15072 1205 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 ZNF30P17039 623 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 CCNA2P20248 432 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 PRDX6P30041 224 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 POLR2JP52435 117 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 UBAP2LQ14157 1087 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 ANKRD49Q8WVL7 239 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 MYDGFQ969H8 173 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 REXO5Q96IC2 774 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 OLFM1Q99784 485 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 ZSCAN5AQ9BUG6 496 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 SUCOQ9UBS9 1254 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 SAMHD1Q9Y3Z3 626 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 GMPPBQ9Y5P6 360 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 FGF18O76093 207 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 ARL13AQ5H913 290 aaPredicted RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 SAPCD2Q86UD0 394 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 GLB1L3Q8NCI6 653 aaPredicted RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 TTLQ8NG68 377 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 RAD9AQ99638 391 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 TDRD1Q9BXT4 1180 aaKnown RBP13.35□□□□□ -0.27
LDB3-202ENST00000361373 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 MAFFQ9ULX9 164 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 PCDHGA4Q9Y5G9 962 aa13.35□□□□□ -0.27
LDB3-202ENST00000361373 EDDM13A0A1B0GTR0 161 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 FAM25AB3EWG3 89 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 FAM25CB3EWG5 89 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 FAM25GB3EWG6 89 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 PRMT3O60678 531 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 CST1P01037 141 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 CHIT1Q13231 466 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 ANGPT1Q15389 498 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 TRIM71Q2Q1W2 868 aaKnown RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 ATXN7L2Q5T6C5 722 aaPredicted RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 AZIN2Q96A70 460 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 AGAP2Q99490 1192 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 SH3GL2Q99962 352 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 DDX18Q9NVP1 670 aaKnown RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 CALML5Q9NZT1 146 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 PTGES3LE9PB15 166 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 LRATO95237 230 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 ANXA4P09525 319 aaPredicted RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 PLA2G4EQ3MJ16 856 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 VPS26BQ4G0F5 336 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 NCBP2-AS2Q69YL0 99 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 RASSF5Q8WWW0 418 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 HSPA7P48741 367 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms