RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 KMOO15229 486 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 SPAG6O75602 509 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 SLC4A1P02730 911 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 KRT7P08729 469 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 PIRTP0C851 137 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 GPR89BP0CG08 455 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 RPL10P27635 214 aaKnown RBP20.77■□□□□ 0.92
CD47-202ENST00000361309 PDK2Q15119 407 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 CACHD1Q5VU97 1274 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 LRRTM4Q86VH4 590 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 RSC1A1Q92681 617 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 GLYATL1Q969I3 302 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 FAF2Q96CS3 445 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 GBP4Q96PP9 640 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 LNPEPQ9UIQ6 1025 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 KCND3Q9UK17 655 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 TLK1Q9UKI8 766 aa20.77■□□□□ 0.92
CD47-202ENST00000361309 A0A087X0T9 212 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 MTX2O75431 263 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 RFPL1O75677 317 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 CCNYL3P0C7X3 344 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 FAM228BP0C875 321 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 FGF5P12034 268 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 BRAFP15056 766 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 CAPZBP47756 277 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 DCDC1P59894 354 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 ZBTB17Q13105 803 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 NR1I3Q14994 352 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 FIGNQ5HY92 759 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 FAM92BQ6ZTR7 304 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 PRSS42Q7Z5A4 293 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 TMC3Q7Z5M5 1100 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 MAP7D3Q8IWC1 876 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 TRAM1L1Q8N609 369 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 CNTD1Q8N815 330 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 KLHL6Q8WZ60 621 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 TIMM29Q9BSF4 260 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 TWSG1Q9GZX9 223 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 BRD8Q9H0E9 1235 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 SLC40A1Q9NP59 571 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 POT1Q9NUX5 634 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 PADI1Q9ULC6 663 aa20.76■□□□□ 0.91
CD47-202ENST00000361309 PIPSLA2A3N6 862 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 GOLGA6L3A6NEY3 463 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 OR52A4PA6NMU1 304 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 CREG1O75629 220 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 SERPING1P05155 500 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 PMS2P54278 862 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 TAS2R40P59535 323 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 DNASE1L3Q13609 305 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 GPR18Q14330 331 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 NFKBIBQ15653 356 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.75■□□□□ 0.91
CD47-202ENST00000361309 PDPK2PQ6A1A2 396 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 IRGCQ6NXR0 463 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 ABRAXAS1Q6UWZ7 409 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 PPP1R3BQ86XI6 285 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 ZNF547Q8IVP9 402 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 ZDHHC12Q96GR4 267 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 TRIB3Q96RU7 358 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 MAGEE1Q9HCI5 957 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 RAD18Q9NS91 495 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 NFKBIL1Q9UBC1 381 aaPredicted RBP20.75■□□□□ 0.91
CD47-202ENST00000361309 TRIM10Q9UDY6 481 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 ZNF711Q9Y462 761 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 PCDHGA6Q9Y5G7 932 aa20.75■□□□□ 0.91
CD47-202ENST00000361309 ESPL1Q14674 2120 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 CDK14O94921 469 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 TIAF1O95411 115 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 CASP14P31944 242 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 DRG2P55039 364 aaKnown RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 IFI35P80217 286 aaPredicted RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 NOTCH2Q04721 2471 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 PPIDQ08752 370 aaKnown RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 KHDC1Q4VXA5 237 aaKnown RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 ALKBH5Q6P6C2 394 aaKnown RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 CT55Q8WUE5 264 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 SYN2Q92777 582 aaPredicted RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 CXorf40BQ96DE9 158 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 ZNF830Q96NB3 372 aaPredicted RBP20.74■□□□□ 0.91
CD47-202ENST00000361309 CEP41Q9BYV8 373 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 GPR63Q9BZJ6 419 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 LRRC4CQ9HCJ2 640 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 LHX9Q9NQ69 397 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 SHANK1Q9Y566 2161 aa20.74■□□□□ 0.91
CD47-202ENST00000361309 VEGFDO43915 354 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 DNAJB5O75953 348 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 PROSCO94903 275 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 SERPINC1P01008 464 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 MT-ND3P03897 115 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 PDGFAP04085 211 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 SPTBP11277 2137 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 BPIP17213 487 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 NELFEP18615 380 aaKnown RBP20.73■□□□□ 0.91
CD47-202ENST00000361309 IDSP22304 550 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 PCSK7Q16549 785 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 C4orf17Q53FE4 359 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 ZFYVE27Q5T4F4 411 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 AGAP9Q5VTM2 703 aa20.73■□□□□ 0.91
CD47-202ENST00000361309 WASH2PQ6VEQ5 465 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms