RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PRICKLE1Q96MT3 831 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 PGLYRP2Q96PD5 576 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 OSBPL10Q9BXB5 764 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 TPK1Q9H3S4 243 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 CAPN10Q9HC96 672 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 POLE3Q9NRF9 147 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 C4AP0C0L4 1744 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 A8MX80 341 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 PRMT5O14744 637 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 SGTAO43765 313 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ZNF182P17025 639 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 EPORP19235 508 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 SLC6A2P23975 617 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 MYL9P24844 172 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 AZGP1P25311 298 aaKnown RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 SH3BP5LQ7L8J4 393 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 LIX1Q8N485 282 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 COPS4Q9BT78 406 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 CAMTA1Q9Y6Y1 1673 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 E7ESA3 106 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 MPZL2O60487 215 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 C8BP07358 591 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 TIGD6Q17RP2 521 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 NDUFAF6Q330K2 333 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 ZZZ3Q8IYH5 903 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 GBA2Q9HCG7 927 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 ANKHQ9HCJ1 492 aa13.84□□□□□ -0.19
SMC5-201ENST00000361138 CNOT11Q9UKZ1 510 aaKnown RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
SMC5-201ENST00000361138 H0YJX3 145 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 hCG_2039718K7EN88 272 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 DLX3O60479 287 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 GTF2H2Q13888 395 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 FBXO48Q5FWF7 155 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 TNFAIP8L3Q5GJ75 292 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 GTF2H2CQ6P1K8 395 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 TRPV3Q8NET8 790 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 ST14Q9Y5Y6 855 aa13.83□□□□□ -0.19
SMC5-201ENST00000361138 CCL15-CCL14A0A0B4J2E2 113 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 NR2F6P10588 404 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 GPD2P43304 727 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ALDH3A2P51648 485 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 CCL15Q16663 113 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 XKR6Q5GH73 641 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 RETSATQ6NUM9 610 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 CLEC4DQ8WXI8 215 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 LYVE1Q9Y5Y7 322 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 LOC100130705A0A1B0GUX0 176 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 IGSF6O95976 241 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 GLDCP23378 1020 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 DNAJB1P25685 340 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 LGALS3BPQ08380 585 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMC5-201ENST00000361138 SPATS1Q496A3 300 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ALFQ53S48 1182 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 TRIM40Q6P9F5 258 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 C1GALT1C1Q96EU7 318 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 GPR21Q99679 349 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ITPAQ9BY32 194 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 WDR70Q9NW82 654 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 GTF2A1LQ9UNN4 478 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 MRPS7Q9Y2R9 242 aaKnown RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 MATN3O15232 486 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 MT-CYBP00156 380 aaPredicted RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 CXCL9Q07325 125 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ERAP2Q6P179 960 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 UBE2QL1A1L167 161 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 A8MT66 165 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ZW10O43264 779 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 KHDRBS3O75525 346 aaKnown RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 OR4F21O95013 312 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 PTGS2P35354 604 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 RPL3P39023 403 aaKnown RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 CDHR3Q6ZTQ4 885 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 HID1Q8IV36 788 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 RNF38Q9H0F5 515 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 ADAMTS10Q9H324 1103 aa13.83□□□□□ -0.2
SMC5-201ENST00000361138 CCDC177Q9NQR7 707 aaPredicted RBP13.83□□□□□ -0.2
SMC5-201ENST00000361138 MYH6P13533 1939 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 TEX47Q8TBZ9 253 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 LRRC20Q8TCA0 184 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
SMC5-201ENST00000361138 MED28Q9H204 178 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 HMGXB4Q9UGU5 601 aa13.82□□□□□ -0.2
SMC5-201ENST00000361138 NEMP2A6NFY4 417 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms