RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TSEN15Q8WW01 171 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 NMUR2Q9GZQ4 415 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 BANF1O75531 89 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ADH1AP07327 375 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 MAB21L1Q13394 359 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ARSJQ5FYB0 599 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 HJURPQ8NCD3 748 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 DEFB129Q9H1M3 183 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ILF3Q12906 894 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 KHDC1Q4VXA5 237 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 DNASE1L1P49184 302 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RGS19P49795 217 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 LAPTM5Q13571 262 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 OR2T12Q8NG77 320 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF471Q9BX82 626 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 GPRC5CQ9NQ84 441 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC22A1O15245 554 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PIAS1O75925 651 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 CDH13P55290 713 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ZPBP2Q6X784 338 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PDCD5O14737 125 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 DBIP07108 87 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 OR8D1Q8WZ84 308 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 HEBP2Q9Y5Z4 205 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 F8A1P23610 371 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PSMB4P28070 264 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SREBF1P36956 1147 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 TXNL4AP83876 142 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PPATQ06203 517 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SYVN1Q86TM6 617 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 THRSPQ92748 146 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 AP2M1Q96CW1 435 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 FEM1AQ9BSK4 669 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 PADI2Q9Y2J8 665 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 KDM6BO15054 1643 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 DNM1LO00429 736 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ALPPL2P10696 532 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 RPA4Q13156 261 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 OTUB2Q96DC9 234 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 LPIN3Q9BQK8 851 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 TMEM27Q9HBJ8 222 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 MICAL2O94851 1124 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 GNALP38405 381 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 AIF1P55008 147 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 MANFP55145 182 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 INHBEP58166 350 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF431Q8TF32 576 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 LRTOMTQ8WZ04 291 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SAGP10523 405 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 CLCN2P51788 898 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 LAMTOR4Q0VGL1 99 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SERPINA13PQ6UXR4 307 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ZC3HC1Q86WB0 502 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 CFAP206Q8IYR0 622 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF99A8MXY4 864 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 ITGAVP06756 1048 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 STXBP1P61764 594 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 GCNT1Q02742 428 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 OR52K1Q8NGK4 314 aa13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms