RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GNB5O14775 395 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 MPP1Q00013 466 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 LMLNQ96KR4 655 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 MGME1Q9BQP7 344 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 TMEM134Q9H6X4 195 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 MED31Q9Y3C7 131 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ADM5C9JUS6 153 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 C22orf31O95567 290 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 RB1P06400 928 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 GRK5P34947 590 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 TOR1AIP1Q5JTV8 583 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 USP30Q70CQ3 517 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 UNC93AQ86WB7 457 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ZMIZ2Q8NF64 920 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 JOSD2Q8TAC2 188 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 DNAJA4Q8WW22 397 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 TAMM41Q96BW9 452 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 HBEGFQ99075 208 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 OR51V1Q9H2C8 321 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ALKBH4Q9NXW9 302 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 COMMD3Q9UBI1 195 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PGAM2P15259 253 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 HTR1BP28222 390 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 CYP2C18P33260 490 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 AQP4P55087 323 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 AP3S2P59780 193 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PEX5LQ8IYB4 626 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ANKRD52Q8NB46 1076 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 OR5B17Q8NGF7 314 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PLCL2Q9UPR0 1127 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 FABP12A6NFH5 140 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 SLC5A3P53794 718 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 DGLUCYQ7Z3D6 616 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 C17orf64Q86WR6 236 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ZBTB2Q8N680 514 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 COPS8Q99627 209 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PAGE1O75459 146 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 S100A2P29034 98 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 PPP3R1P63098 170 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF627Q7L945 461 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 CLNKQ7Z7G1 428 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF567Q8N184 647 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 MAB21L3Q8N8X9 362 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 ERMAPQ96PL5 475 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-203ENST00000359759 GULP1Q9UBP9 304 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 MFHAS1Q9Y4C4 1052 aa15.91■□□□□ 0.14
COL18A1-203ENST00000359759 SMIM10L2AP0DMW4 78 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 SMIM10L2BP0DMW5 78 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 NOMO3P69849 1222 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 LARS2Q15031 903 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 IL23RQ5VWK5 629 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 LNX2Q8N448 690 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CLP1Q92989 425 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ZSCAN5AQ9BUG6 496 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 FBXW2Q9UKT8 454 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 A0A1W2PQH9 124 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 H3BM21 787 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TPTEP56180 551 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 DNASE1L3Q13609 305 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF460Q14592 562 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CAPN13Q6MZZ7 669 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ADGRG6Q86SQ4 1221 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 PHF13Q86YI8 300 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TTC29Q8NA56 475 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 B3GNT5Q9BYG0 378 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 AGO3Q9H9G7 860 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 OR2AT4A6NND4 320 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CLPXO76031 633 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 IPO13O94829 963 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 SCGB1D2O95969 90 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ITIH1P19827 911 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 PRKCIP41743 596 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 GNPDA1P46926 289 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 MRPS5P82675 430 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 PSMD5Q16401 504 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 CRTC2Q53ET0 693 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 RALGPS1Q5JS13 557 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 LRRC38Q5VT99 294 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ECHDC2Q86YB7 292 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 AIFM2Q9BRQ8 373 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 PLK2Q9NYY3 685 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 MRPS23Q9Y3D9 190 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3DA0A087WVF3 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3IA0A087WXS9 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3EA0A087X179 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3KA0A087X1G2 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3FA6NER0 549 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 SAGE2PA6NJ88 616 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ANXA2P2A6NMY6 339 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3LB9A6J9 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TM7SF2O76062 418 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 RASGRP1O95267 797 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 ANXA2P07355 339 aaKnown RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3HP0C7X1 549 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 RYKP34925 604 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 IKBKEQ14164 716 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 MPP2Q14168 576 aa15.9■□□□□ 0.14
COL18A1-203ENST00000359759 USF2Q15853 346 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-203ENST00000359759 TBC1D3GQ6DHY5 549 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms