RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SLC6A11P48066 632 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ERVK-21P61565 698 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 FAM83EQ2M2I3 478 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 LRRC66Q68CR7 880 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 FGF13Q92913 245 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ESAMQ96AP7 390 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 MARK4Q96L34 752 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 COG4Q9H9E3 785 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 FAM32AQ9Y421 112 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 A0A087X1B8 175 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 UBXN8O00124 270 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 WISP3O95389 354 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 RB1P06400 928 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 ENO1P06733 434 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 PABPC4LP0CB38 370 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 BPIP17213 487 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 GRK2P25098 689 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 HOXA9P31269 272 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 HMGCLP35914 325 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CDH13P55290 713 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 TBL3Q12788 808 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 GSTA3Q16772 222 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KLHL35Q6PF15 583 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SLC7A5P1Q8MH63 180 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 GPR150Q8NGU9 434 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 NXPE3Q969Y0 559 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SLC7A6OSQ96CW6 309 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 NUF2Q9BZD4 464 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 IL26Q9NPH9 171 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 DDX18Q9NVP1 670 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 FAIMQ9NVQ4 179 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KCNK4Q9NYG8 393 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SCN8AQ9UQD0 1980 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 MUC3AQ02505 3323 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KANSL1LA0AUZ9 987 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 OR6B1O95007 311 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 IL1BP01584 269 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 HLA-EP13747 358 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 EPHA3P29320 983 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SERPINA4P29622 427 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 RXRGP48443 463 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 IDH3AP50213 366 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 TUBB3Q13509 450 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KHDC1Q4VXA5 237 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 WASHC2DQ5SRD0 308 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 RAB3IL1Q8TBN0 382 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 LKAAEAR1Q8TD35 194 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 MRPL57Q9BQC6 102 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SLC7A5P2Q9GIP4 190 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 LRMDAQ9H2I8 198 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 TPK1Q9H3S4 243 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 NCKIPSDQ9NZQ3 722 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 MBD1Q9UIS9 605 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SLC25A13Q9UJS0 675 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 FADS3Q9Y5Q0 445 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 PRR5-ARHGAP8B1AHC4 643 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 WASH3PC4AMC7 463 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CDC7O00311 574 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CTSLP07711 333 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CD1DP15813 335 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 OGNP20774 298 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 ENDOUP21128 410 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CES1P23141 567 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 ARHGAP8P85298 464 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 KDSRQ06136 332 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CDKN3Q16667 212 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 AGAP9Q5VTM2 703 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 GPR26Q8NDV2 337 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CEP70Q8NHQ1 597 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 GAB3Q8WWW8 586 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 NSUN5Q96P11 429 aaKnown RBP12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CCDC28BQ9BUN5 200 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 CCDC68Q9H2F9 335 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 ASB8Q9H765 288 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
GGPS1-202ENST00000358966 NPEPPSL1A6NEC2 478 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 MEI4A8MW99 385 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 PRRT4C9JH25 899 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 PLK4O00444 970 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 MTX2O75431 263 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 CHRM3P20309 590 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms