RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 ZNF296Q8WUU4 475 aaPredicted RBP14.11□□□□□ -0.15
SIRPA-202ENST00000358771 PLD4Q96BZ4 506 aa14.11□□□□□ -0.15
SIRPA-202ENST00000358771 IGSF21Q96ID5 467 aa14.11□□□□□ -0.15
SIRPA-202ENST00000358771 NR1H4Q96RI1 486 aaPredicted RBP14.11□□□□□ -0.15
SIRPA-202ENST00000358771 NSUN3Q9H649 340 aaKnown RBP14.11□□□□□ -0.15
SIRPA-202ENST00000358771 ANAPC2Q9UJX6 822 aa14.11□□□□□ -0.15
SIRPA-202ENST00000358771 SNX5Q9Y5X3 404 aa14.11□□□□□ -0.15
SIRPA-202ENST00000358771 U3KQV3 271 aa14.11□□□□□ -0.15
SIRPA-202ENST00000358771 MYOCOSA0A1B0GUC4 107 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 VPS4BO75351 444 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 WDR47O94967 919 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 EFNA1P20827 205 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 SH3BGRP55822 239 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 SH3BP2P78314 561 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 CACNG1Q06432 222 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TRAPPC5Q8IUR0 188 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 NRBF2Q96F24 287 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TFB2MQ9H5Q4 396 aaKnown RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 CACNA2D2Q9NY47 1150 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 KIAA1522Q9P206 1035 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 PDLIM1O00151 329 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 INPPL1O15357 1258 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 POLR2JP52435 117 aaKnown RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 DGKQP52824 942 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 MTPNP58546 118 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 NEDD8Q15843 81 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 UNC50Q53HI1 259 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 RABL3Q5HYI8 236 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 PRMT9Q6P2P2 845 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TXNDC11Q6PKC3 985 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 DOK6Q6PKX4 331 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 RSPO2Q6UXX9 243 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 SPATA17Q96L03 361 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TMEM74Q96NL1 305 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TCF12Q99081 682 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 IGSF5Q9NSI5 407 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 LDB2O43679 373 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 PAPSS2O95340 614 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 ADH1AP07327 375 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 CD1DP15813 335 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 S100A3P33764 101 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 CTNNB1P35222 781 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 STK19P49842 368 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 LIPEQ05469 1076 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 PPP1R8Q12972 351 aaKnown RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 MBTPS1Q14703 1052 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 CBX2Q14781 532 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 ACBD5Q5T8D3 534 aaPredicted RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 THAP11Q96EK4 314 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 TREX1Q9NSU2 369 aa14.1□□□□□ -0.15
SIRPA-202ENST00000358771 INTS10Q9NVR2 710 aaKnown RBP14.1□□□□□ -0.15
SIRPA-202ENST00000358771 KDELR3O43731 214 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ESR1P03372 595 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ADSLP30566 484 aaPredicted RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 SOAT1P35610 550 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 PTGER3P43115 390 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 PIANPQ8IYJ0 282 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 PGBD5Q8N414 524 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 CBR4Q8N4T8 237 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 NOL6Q9H6R4 1146 aaKnown RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ZNF490Q9ULM2 529 aaPredicted RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 KERAO60938 352 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ARNTP27540 789 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 RPIAP49247 311 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 FOXA1P55317 472 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 MS4A2Q01362 244 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 RING1Q06587 406 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 PLCL1Q15111 1095 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 CHRNA6Q15825 494 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 UBE2R2Q712K3 238 aaPredicted RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 GPR156Q8NFN8 814 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ARRDC2Q8TBH0 407 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 MPP4Q96JB8 637 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ZNF599Q96NL3 588 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 CCNHP51946 323 aaPredicted RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 UFM1P61960 85 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 DSC1Q08554 894 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 GTF2H2Q13888 395 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 GTF2H2CQ6P1K8 395 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 KBTBD2Q8IY47 623 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 ZNF555Q8NEP9 628 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 SLC39A13Q96H72 371 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 APOLD1Q96LR9 279 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 RNF38Q9H0F5 515 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 MRM3Q9HC36 420 aaKnown RBP14.09□□□□□ -0.15
SIRPA-202ENST00000358771 DNAJC15Q9Y5T4 150 aa14.09□□□□□ -0.15
SIRPA-202ENST00000358771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.08□□□□□ -0.15
SIRPA-202ENST00000358771 FFAR2O15552 330 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 SNUPNO95149 360 aaKnown RBP14.08□□□□□ -0.15
SIRPA-202ENST00000358771 C1QAP02745 245 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 UROSP10746 265 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 ATF6P18850 670 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 IRX1P78414 480 aaPredicted RBP14.08□□□□□ -0.15
SIRPA-202ENST00000358771 ADGRE1Q14246 886 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 NADSYN1Q6IA69 706 aa14.08□□□□□ -0.15
SIRPA-202ENST00000358771 DHRSXQ8N5I4 330 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms