RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 NCSTNQ92542 709 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 USP13Q92995 863 aaPredicted RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SMIM14Q96QK8 99 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ATOH8Q96SQ7 321 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 CCDC68Q9H2F9 335 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 PLK2Q9NYY3 685 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ADA2Q9NZK5 511 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 MAFFQ9ULX9 164 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 PCDHGC4Q9Y5F7 938 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TXNDC9O14530 226 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 XYLBO75191 536 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SRP72O76094 671 aaKnown RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TMCC1O94876 653 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 PPP3CCP48454 512 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 STX1BP61266 288 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ZP2Q05996 745 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 RAD51Q06609 339 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TRAF2Q12933 501 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SETMARQ53H47 684 aaPredicted RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SAMD4BQ5PRF9 694 aaKnown RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ZNF783Q6ZMS7 281 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 LARP4Q71RC2 724 aaKnown RBP eCLIP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 RTL10Q7L3V2 364 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 GJD3Q8N144 294 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 KIAA1191Q96A73 305 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ROPN1LQ96C74 230 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 NECTIN4Q96NY8 510 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 GCNAQ96QF7 691 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SPATA16Q9BXB7 569 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 DERL2Q9GZP9 239 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 EPHX3Q9H6B9 360 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 SPAG4Q9NPE6 437 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TAS2R13Q9NYV9 303 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 STOML2Q9UJZ1 356 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 MYO10Q9HD67 2058 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 C15orf38-AP3S2A0A0A6YYH1 394 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 SNAP91O60641 907 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 DNAJA2O60884 412 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 TBL1XO60907 577 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 KERAO60938 352 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 LATS1O95835 1130 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 CD160O95971 181 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 POU2F2P09086 479 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 MBL2P11226 248 aaPredicted RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 MTHFD2P13995 350 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 ATP6V0D1P61421 351 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 TLR1Q15399 786 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 NAIF1Q69YI7 327 aaPredicted RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 C8orf82Q6P1X6 216 aaPredicted RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 PRMT9Q6P2P2 845 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 FBXL19Q6PCT2 694 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 NCEH1Q6PIU2 408 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 PAQR3Q6TCH7 311 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 LINGO4Q6UY18 593 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 CYHR1Q6ZMK1 362 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 ARPINQ7Z6K5 226 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 SPATA24Q86W54 205 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 C19orf60Q96EN9 201 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 CYP2S1Q96SQ9 504 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 PHF7Q9BWX1 381 aaPredicted RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 COPS7BQ9H9Q2 264 aaPredicted RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 SMPD4Q9NXE4 827 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 DNMT3BQ9UBC3 853 aaKnown RBP14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 FKBPLQ9UIM3 349 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 VPS9D1Q9Y2B5 631 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 MED16Q9Y2X0 877 aa14.16□□□□□ -0.14
NIPAL3-203ENST00000358028 LRRC14BA6NHZ5 514 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 SUPT3HB4E1H0 165 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 ANKRD66B4E2M5 251 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 STX16-NPEPL1H3BU86 382 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 FBP2O00757 339 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 MRASO14807 208 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 NRP2O60462 931 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 SUPT3HO75486 399 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 SIX3O95343 332 aaPredicted RBP14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 GFAPP14136 432 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 MC4RP32245 332 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 CDKN1CP49918 316 aaPredicted RBP14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 CDH13P55290 713 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 SH3BP2P78314 561 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 RHDQ02161 417 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 PFKFB4Q16877 469 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 UGT3A2Q3SY77 523 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 SPATS1Q496A3 300 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 FAM219BQ5XKK7 198 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 ADHFE1Q8IWW8 467 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 LILRA2Q8N149 483 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 AHI1Q8N157 1196 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 TMEM102Q8N9M5 508 aaPredicted RBP14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 PCYOX1LQ8NBM8 494 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 STAG3L4Q8TBR4 150 aa14.15□□□□□ -0.14
NIPAL3-203ENST00000358028 ZFRQ96KR1 1074 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms