RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 BNC1Q01954 994 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 DHRSXQ8N5I4 330 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM156Q8N614 296 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CATSPER1Q8NEC5 780 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CMTM6Q9NX76 183 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TRIM64BA6NI03 449 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 YJEFN3A6XGL0 299 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 E7ENQ6 273 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 MAGEB3O15480 346 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SCGB1D2O95969 90 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CD53P19397 219 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 ITGB8P26012 769 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 AUHQ13825 339 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CCDC153Q494R4 210 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 ACTRT2Q8TDY3 377 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TSEN15Q8WW01 171 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TRIM63Q969Q1 353 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SNX15Q9NRS6 342 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 IL36AQ9UHA7 158 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 VWA7Q9Y334 891 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TGFB1I1O43294 461 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TSPAN1O60635 241 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SERPINA3P01011 423 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 OLR1P78380 273 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TTC23Q5W5X9 447 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 KIAA0408Q6ZU52 694 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 OR52L1Q8NGH7 329 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 KBTBD7Q8WVZ9 684 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 PLGRKTQ9HBL7 147 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 RHCGQ9UBD6 479 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SAMHD1Q9Y3Z3 626 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 PLXNC1O60486 1568 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CABYRO75952 493 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CCNDBP1O95273 360 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SIX3O95343 332 aaPredicted RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 IFNA14P01570 189 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 RCVRNP35243 200 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CLCNKAP51800 687 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 IER5LQ5T953 404 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C17orf64Q86WR6 236 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 PLCZ1Q86YW0 608 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 KREMEN1Q96MU8 473 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 HEPHQ9BQS7 1158 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TRHDEQ9UKU6 1024 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 UBIAD1Q9Y5Z9 338 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 A0A0J9YYE9 177 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 A0A1B0GVT2 93 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 FGF18O76093 207 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C4BPAP04003 597 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 RAB10P61026 200 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TUSC3Q13454 348 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C4orf22Q6V702 233 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CHRDL2Q6WN34 429 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 GAL3ST3Q96A11 431 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SAT2Q96F10 170 aaPredicted RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 FAIM2Q9BWQ8 316 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 MRPS26Q9BYN8 205 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 LMAN2LQ9H0V9 348 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SNTG1Q9NSN8 517 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CCDC162PA2VCL2 907 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 QSOX1O00391 747 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 B4GALT4O60513 344 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 ATP6V1G2O95670 118 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 IL7RP16871 459 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SLC6A2P23975 617 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 BDKRB1P46663 353 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 HMGCS1Q01581 520 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 IL18R1Q13478 541 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 QPCTQ16769 361 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C1orf127Q8N9H9 656 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 KYQ8NBH2 561 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 OLFM3Q96PB7 478 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 BCO2Q9BYV7 579 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 DNAAF2Q9NVR5 837 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SEC14L3Q9UDX4 400 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 GJD2Q9UKL4 321 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 NR2E1Q9Y466 385 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C11orf98E9PRG8 122 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 G3V2T6 193 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 AP2A2O94973 939 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM11P17152 192 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 LAG3P18627 525 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CMPK1P30085 196 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 GRM5P41594 1212 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 CCT3P49368 545 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 EIF2B2P49770 351 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 SMARCB1Q12824 385 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 C3orf20Q8ND61 904 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 GPR151Q8TDV0 419 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 COQ8BQ96D53 544 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 PIWIL1Q96J94 861 aaKnown RBP7.29□□□□□ -1.24
VPS13A-202ENST00000357409 DUSP16Q9BY84 665 aa7.29□□□□□ -1.24
VPS13A-202ENST00000357409 MAGEB16A2A368 324 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 REM1O75628 298 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TNFP01375 233 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 MYBL2P10244 700 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TSNQ15631 228 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TAB1Q15750 504 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms