RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PDSS2Q86YH6 399 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TRPM4Q8TD43 1214 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 C10orf82Q8WW14 230 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 COLEC11Q9BWP8 271 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SEMA6AQ9H2E6 1030 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 C12orf4Q9NQ89 552 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 POFUT2Q9Y2G5 429 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 MED13Q9UHV7 2174 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SH3D21A4FU49 640 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SCN2BO60939 215 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 LPOP22079 712 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 CDKN2BP42772 138 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 UBXN2AP68543 259 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SGO1Q5FBB7 561 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PGAP1Q75T13 922 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 FBXO32Q969P5 355 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PANX1Q96RD7 426 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 HAPLN3Q96S86 360 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 INTS7Q9NVH2 962 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PAPSS2O95340 614 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 FPR1P21462 350 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GSTM2P28161 218 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 CHRNA5P30532 468 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 EIF2DP41214 584 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ARCN1P48444 511 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 UBE2J2Q8N2K1 259 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SMG7Q92540 1137 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 IFT27Q9BW83 186 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 NFKBIL1Q9UBC1 381 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PIK3C2BO00750 1634 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PRR5-ARHGAP8B1AHC4 643 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 WNT7AO00755 349 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 HTR2AP28223 471 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 DNAJB13P59910 316 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ARHGAP8P85298 464 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 RHEBQ15382 184 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF517Q6ZMY9 492 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SLC7A6OSQ96CW6 309 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ATP13A3Q9H7F0 1226 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 DNAJC11Q9NVH1 559 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TATDN1Q6P1N9 297 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SLC27A1Q6PCB7 646 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ZCCHC12Q6PEW1 402 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TLE6Q9H808 572 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TRMT13Q9NUP7 481 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SIRPGQ9P1W8 387 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SLC7A8Q9UHI5 535 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ZFYVE26Q68DK2 2539 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 NAP1L6A6NFF2 107 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GABRDO14764 452 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ENTPD6O75354 484 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 STAU1O95793 577 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ENDOUP21128 410 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 MTHFRP42898 656 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ABATP80404 500 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 KCNC4Q03721 635 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ACSBG2Q5FVE4 666 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 MEDAGQ5VYS4 303 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 LCLAT1Q6UWP7 414 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 OR8J3Q8NGG0 315 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 KCTD13Q8WZ19 329 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ITM2CQ9NQX7 267 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 USP21Q9UK80 565 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 BTN3A1O00481 513 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 RFXANKO14593 260 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 FUT11Q495W5 492 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ARMC12Q5T9G4 340 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 OTOP1Q7RTM1 612 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PTGR2Q8N8N7 351 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GBA3Q9H227 469 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ALG9Q9H6U8 611 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 NEUROD4Q9HD90 331 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 COL1A2P08123 1366 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 OR10H3O60404 316 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 CYP11A1P05108 521 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 HCAR3P49019 387 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GNA12Q03113 381 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ELOAQ14241 798 aaKnown RBP6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PERM1Q5SV97 790 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 KLHL35Q6PF15 583 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 HS6ST3Q8IZP7 471 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 GDPD1Q8N9F7 314 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 OR8H1Q8NGG4 311 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 SLCO1B3Q9NPD5 702 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 NUP50Q9UKX7 468 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 POLR1DQ9Y2S0 133 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 LYVE1Q9Y5Y7 322 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 AGPSO00116 658 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PPEF2O14830 753 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 THP07101 528 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PRPS1L1P21108 318 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 TUBP50607 506 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 PLK1P53350 603 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 DSG2Q14126 1118 aa6.52□□□□□ -1.37
VPS13B-202ENST00000357162 ANKRD22Q5VYY1 191 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms