RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CA5AP35218 305 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 CCT8P50990 548 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 LRP8Q14114 963 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 KHDC1Q4VXA5 237 aaKnown RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 PYCR3Q53H96 274 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ZNF542PQ5EBM4 170 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ZNF648Q5T619 568 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ZNF449Q6P9G9 518 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 PACS1Q6VY07 963 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 C3orf62Q6ZUJ4 267 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 MARK2Q7KZI7 788 aaKnown RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 LRRTM4Q86VH4 590 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 CILP2Q8IUL8 1156 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 FSTL5Q8N475 847 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 C9orf72Q96LT7 481 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 DNAAF2Q9NVR5 837 aaKnown RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 MARCH4Q9P2E8 410 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 SPASTQ9UBP0 616 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ZNHIT2Q9UHR6 403 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 KLF15Q9UIH9 416 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 NEMP2A6NFY4 417 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 KMOO15229 486 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 AP2A2O94973 939 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 FUCA1P04066 466 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 GNPDA1P46926 289 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 SUZ12Q15022 739 aaKnown RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ELOCQ15369 112 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ERCC6LQ2NKX8 1250 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 TYSND1Q2T9J0 566 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 ZNF470Q6ECI4 717 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 RASGEF1AQ8N9B8 481 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 OR2M4Q96R27 311 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 PLAC1Q9HBJ0 212 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 TM7SF3Q9NS93 570 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 INTS10Q9NVR2 710 aaKnown RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 MOCS1Q9NZB8 636 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 IL1RAPL1Q9NZN1 696 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 PNMA8BQ9ULN7 279 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 GPSM3Q9Y4H4 160 aa15.35■□□□□ 0.05
TRIM13-201ENST00000356017 DNMT3AQ9Y6K1 912 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-201ENST00000356017 KLHL33A6NCF5 533 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PCDHGA12O60330 932 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 KCNJ13O60928 360 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PIAS2O75928 621 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 ERVK-10P10266 1014 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 EPHA8P29322 1005 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-201ENST00000356017 SSTR1P30872 391 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PHBP35232 272 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 B4GALNT1Q00973 533 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 MGAT5Q09328 741 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 ILF3Q12906 894 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM13-201ENST00000356017 SEMA3AQ14563 771 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PRRT3Q5FWE3 981 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 WDR93Q6P2C0 686 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 TMEM220Q6QAJ8 160 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 CCNI2Q6ZMN8 369 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-201ENST00000356017 KIAA0408Q6ZU52 694 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 LRRC6Q86X45 466 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 TRAPPC5Q8IUR0 188 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 CNTN4Q8IWV2 1026 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 SGF29Q96ES7 293 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 CLPBQ9H078 707 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 VPS37BQ9H9H4 285 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 IL21RQ9HBE5 538 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 LRRC4CQ9HCJ2 640 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 IARS2Q9NSE4 1012 aaKnown RBP15.34■□□□□ 0.05
TRIM13-201ENST00000356017 ZFATQ9P243 1243 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PCDHGB2Q9Y5G2 931 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
TRIM13-201ENST00000356017 CSNK1G3Q9Y6M4 447 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PI4KAP42356 2102 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 PCDH15Q96QU1 1955 aa15.34■□□□□ 0.05
TRIM13-201ENST00000356017 CACNA1EQ15878 2313 aa15.33■□□□□ 0.05
TRIM13-201ENST00000356017 OR2AG2A6NM03 316 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 CDX4O14627 284 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 PRMT5O14744 637 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 AQP9O43315 295 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 VCLP18206 1134 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 DGKAP23743 735 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 STX2P32856 288 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 ADARP55265 1226 aaKnown RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 SHBQ15464 509 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 BCL7AQ4VC05 210 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 KCTD16Q68DU8 428 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 LDB1Q86U70 411 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 UNC5BQ8IZJ1 945 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 ZNF548Q8NEK5 533 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 OR2I1PQ8NGU4 316 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 SAP25Q8TEE9 199 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 CDKL2Q92772 493 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 LRRC61Q9BV99 259 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 BOCQ9BWV1 1114 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 GSDMCQ9BYG8 508 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 NSMCE4AQ9NXX6 385 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 FBXO5Q9UKT4 447 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms