RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF347Q96SE7 839 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 TCF25Q9BQ70 676 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 ITPAQ9BY32 194 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 SEMA3GQ9NS98 782 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 CKLFQ9UBR5 152 aa12.62□□□□□ -0.39
SYNCRIP-201ENST00000355238 MEIS2O14770 477 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 NDUFB5O43674 189 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 ITM2AO43736 263 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 LRCH4O75427 683 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CETPP11597 493 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TEAD4Q15561 434 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 SENP8Q96LD8 212 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 C2orf49Q9BVC5 232 aaPredicted RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 LRRC3Q9BY71 257 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 GBA3Q9H227 469 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 GMIPQ9P107 970 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 MAP10Q9P2G4 905 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 SEC14L3Q9UDX4 400 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CKMT2P17540 419 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TAL1P17542 331 aaPredicted RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 AQP1P29972 269 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDH15P55291 814 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CD83Q01151 205 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC18A2Q05940 514 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CBLBQ13191 982 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TCEAL5Q5H9L2 206 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TMEM53Q6P2H8 277 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 XYLT1Q86Y38 959 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLP1Q92989 425 aaKnown RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 NSMCE3Q96MG7 304 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 LMAN2LQ9H0V9 348 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 ITPK1Q13572 414 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF730Q6ZMV8 503 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TRAPPC5Q8IUR0 188 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 PHC2Q8IXK0 858 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 ACO2Q99798 780 aaKnown RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 OAZ3Q9UMX2 235 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 NOBOXO60393 691 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 DNTTP04053 509 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 EFR3AQ14156 821 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 LY6KQ17RY6 165 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 OR10A6Q8NH74 314 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 FNDC8Q8TC99 324 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 STON2Q8WXE9 905 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 EIF2B3Q9NR50 452 aaKnown RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 POLLQ9UGP5 575 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 TIMM22Q9Y584 194 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 XRCC1P18887 633 aaPredicted RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 MC4RP32245 332 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC9B1Q4ZJI4 515 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 SFT2D3Q587I9 215 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 ULK3Q6PHR2 472 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 PCDHAC1Q9H158 963 aa12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 UXTQ9UBK9 157 aaPredicted RBP12.61□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDC40O60508 579 aaKnown RBP eCLIP12.6□□□□□ -0.396e-6■■■■■ 29.1
SYNCRIP-201ENST00000355238 COL6A1P12109 1028 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 CD72P21854 359 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 GLDCP23378 1020 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 BRMS1LQ5PSV4 323 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 GPR158Q5T848 1215 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 DNAJB7Q7Z6W7 309 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF557Q8N988 423 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 MRPL45Q9BRJ2 306 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 AXIN1O15169 862 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 FMO3P31513 532 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 CCR10P46092 362 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ENTPD1P49961 510 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 MANFP55145 182 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ECM1Q16610 540 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF773Q6PK81 442 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ITPKCQ96DU7 683 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 GDAP2Q9NXN4 497 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PRODHO43272 600 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 RECQL4O94761 1208 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PKMP14618 531 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ACSL1P33121 698 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 MBTD1Q05BQ5 628 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 RBBP4Q09028 425 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ASCC1Q8N9N2 400 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PKP2Q99959 881 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 BHLHE41Q9C0J9 482 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ABCG8Q9H221 673 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 BPIFA1Q9NP55 256 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 UCKL1Q9NWZ5 548 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms