RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TERF2Q15554 542 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 RAET1GQ6H3X3 334 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 LRRC8EQ6NSJ5 796 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 KLC3Q6P597 504 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 SYT13Q7L8C5 426 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 PHYKPLQ8IUZ5 450 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 UBALD2Q8IYN6 164 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 PELI3Q8N2H9 469 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 FSTL5Q8N475 847 aaPredicted RBP15.43■□□□□ 0.06
CTSA-202ENST00000354880 SIDT2Q8NBJ9 832 aaKnown RBP15.43■□□□□ 0.06
CTSA-202ENST00000354880 FLCNQ8NFG4 579 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 CD200R1Q8TD46 325 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 SCYL1Q96KG9 808 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 NELL2Q99435 816 aa15.43■□□□□ 0.06
CTSA-202ENST00000354880 UNKQ9C0B0 810 aaKnown RBP15.43■□□□□ 0.06
CTSA-202ENST00000354880 SARS2Q9NP81 518 aaKnown RBP15.43■□□□□ 0.06
CTSA-202ENST00000354880 FAM170BA6NMN3 283 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 K7ESM1 405 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 BIRC5O15392 142 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 MTX2O75431 263 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 BPGMP07738 259 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 MSH3P20585 1137 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 CLCN7P51798 805 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 SEC24CP53992 1094 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 FZD5Q13467 585 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 ACAP2Q15057 778 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 AGERQ15109 404 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 SEL1L3Q68CR1 1132 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 KIAA1161Q6NSJ0 714 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 LRRC8CQ8TDW0 803 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 HMGB4Q8WW32 186 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 SLC30A3Q99726 388 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 MECRQ9BV79 373 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 FOXQ1Q9C009 403 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 EPN3Q9H201 632 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 PREBQ9HCU5 417 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 CPSF2Q9P2I0 782 aaKnown RBP15.42■□□□□ 0.06
CTSA-202ENST00000354880 COPG2Q9UBF2 871 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 ZFR2Q9UPR6 939 aaKnown RBP15.42■□□□□ 0.06
CTSA-202ENST00000354880 DHRS7Q9Y394 339 aa15.42■□□□□ 0.06
CTSA-202ENST00000354880 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 TK2O00142 265 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 INPP4BO15327 924 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 ATG13O75143 517 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 TRIM16O95361 564 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 OR56A5P0C7T3 313 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 NEFHP12036 1026 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 NUDCD3Q8IVD9 361 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 NKAPQ8N5F7 415 aaKnown RBP15.41■□□□□ 0.06
CTSA-202ENST00000354880 GIMAP7Q8NHV1 300 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 CHMP6Q96FZ7 201 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 ZNF317Q96PQ6 595 aaPredicted RBP15.41■□□□□ 0.06
CTSA-202ENST00000354880 PANX3Q96QZ0 392 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 MRPL57Q9BQC6 102 aaKnown RBP15.41■□□□□ 0.06
CTSA-202ENST00000354880 MRPL46Q9H2W6 279 aaKnown RBP15.41■□□□□ 0.06
CTSA-202ENST00000354880 XPR1Q9UBH6 696 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 MID2Q9UJV3 735 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 CNOT6Q9ULM6 557 aaKnown RBP15.41■□□□□ 0.06
CTSA-202ENST00000354880 DOCK9Q9BZ29 2069 aa15.41■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3DA0A087WVF3 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3IA0A087WXS9 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3EA0A087X179 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3KA0A087X1G2 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3FA6NER0 549 aaPredicted RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 PRR23AA6NEV1 266 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TCP11X1B4DZS4 312 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3LB9A6J9 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 AP2A2O94973 939 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3HP0C7X1 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 CPA3P15088 417 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 CD1DP15813 335 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 ITGB6P18564 788 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TAC1P20366 129 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TPMTP51580 245 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 GAS6Q14393 721 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 PCLAFQ15004 111 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 KHDC1Q4VXA5 237 aaKnown RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3GQ6DHY5 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3CQ6IPX1 549 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 NEK5Q6P3R8 708 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 RGS9BPQ6ZS82 235 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 DET1Q7L5Y6 550 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 FAM124AQ86V42 546 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TBC1D3Q8IZP1 549 aaPredicted RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 TMEM151AQ8N4L1 468 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 RDH11Q8TC12 318 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 LKAAEAR1Q8TD35 194 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 ZNF75CPQ92670 426 aaPredicted RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 OSBPL6Q9BZF3 934 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 KDM4CQ9H3R0 1056 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 SPATS2LQ9NUQ6 558 aaKnown RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 SIRPGQ9P1W8 387 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 A0A1W2PQU0 124 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 RNGTTO60942 597 aaKnown RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 PAK4O96013 591 aaPredicted RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
CTSA-202ENST00000354880 RBP1P09455 135 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 SBK3P0C264 359 aa15.4■□□□□ 0.06
CTSA-202ENST00000354880 TFEBP19484 476 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms