RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CBWD3Q5JTY5 395 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RARS2Q5T160 578 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 FNDC7Q5VTL7 733 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 LMNTD2Q8IXW0 634 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ZBTB44Q8NCP5 570 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CEP76Q8TAP6 659 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA20Q8TB22 786 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 FAM46BQ96A09 425 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SLC41A2Q96JW4 573 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 FERMT1Q9BQL6 677 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SH2D3AQ9BRG2 576 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SPATC1LQ9H0A9 340 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL13Q9P2N7 655 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MOSPD1Q9UJG1 213 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TINAGQ9UJW2 476 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SH2B3Q9UQQ2 575 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EPN1Q9Y6I3 576 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 UTRNP46939 3433 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ASPMQ8IZT6 3477 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PPFIA2O75334 1257 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 WISP2O76076 250 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TMCC1O94876 653 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TOP3BO95985 862 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 LCATP04180 440 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CYP2A6P11509 494 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CHRNA5P30532 468 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TNFSF8P32971 234 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MPLP40238 635 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GRIA3P42263 894 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RBPJQ06330 500 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ITGADQ13349 1161 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PRKD1Q15139 912 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EFNB3Q15768 340 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PNLIPRP3Q17RR3 467 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TIGD2Q4W5G0 525 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 KRT39Q6A163 491 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SLC27A1Q6PCB7 646 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MEX3BQ6ZN04 569 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM173Q86WV6 379 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 FAM114A1Q8IWE2 563 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ADGRF4Q8IZF3 695 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 C8orf58Q8NAV2 365 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ATAD1Q8NBU5 361 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF540Q8NDQ6 660 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PROKR1Q8TCW9 393 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HDAC7Q8WUI4 952 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SLC44A1Q8WWI5 657 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HDAC11Q96DB2 347 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PARK7Q99497 189 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HNRNPABQ99729 332 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SLC25A23Q9BV35 468 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RNF26Q9BY78 433 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RTN4RQ9BZR6 473 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM206Q9H813 350 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PDGFCQ9NRA1 345 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CYSLTR2Q9NS75 346 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 KCNK6Q9Y257 313 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 STON1Q9Y6Q2 735 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 C10orf71Q711Q0 1435 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 AKAP9Q99996 3911 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RPRD2Q5VT52 1461 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RAPGEF2Q9Y4G8 1499 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MAP3K5Q99683 1374 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HEG1Q9ULI3 1381 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MAGEA13PA6NCF6 341 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TRIM64CA6NLI5 447 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RHODO00212 210 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EBAG9O00559 213 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 HSPB6O14558 160 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 XRCC3O43542 346 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 JRKO75564 520 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 DDNO94850 711 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 UROSP10746 265 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GHRP10912 638 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PFKFB1P16118 471 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ACRV1P26436 265 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 EPHB2P29323 1055 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 MATR3P43243 847 aaKnown RBP eCLIP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 CAMLGP49069 296 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 GMPSP49915 693 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 RAB28P51157 221 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SMSP52788 366 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SIM1P81133 766 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 FOLH1Q04609 750 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 KARSQ15046 597 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PCGF3Q3KNV8 242 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 C6orf141Q5SZD1 244 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PRAMEF8Q5VWM4 474 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SLC29A4Q7RTT9 530 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA21Q7Z572 469 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ADCK2Q7Z695 626 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 AQP12AQ8IXF9 295 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 BOLLQ8N9W6 283 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 PNLDC1Q8NA58 520 aaKnown RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 WIPF2Q8TF74 440 aaPredicted RBP1.63□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM170AQ8WVE7 144 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 NSMAFQ92636 917 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA33Q96N06 139 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 C8orf49Q96NF6 230 aa1.63□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF582Q96NG8 517 aaPredicted RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms