RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PPWD1Q96BP3 646 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 VCX3AQ9NNX9 186 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 RNF11Q9Y3C5 154 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 DHRS12A0PJE2 317 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 ASPDHA6ND91 283 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 GIPC1O14908 333 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 EEDO75530 441 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 OR6B1O95007 311 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 ERVK-8P63133 956 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 INPP5AQ14642 412 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 RBBP7Q16576 425 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 LINGO4Q6UY18 593 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 TRMT2BQ96GJ1 504 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 PDLIM5Q96HC4 596 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 PLEKHG4BQ96PX9 1271 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 VN1R3Q9BXE9 311 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 NUDT4Q9NZJ9 180 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 IL17CQ9P0M4 197 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 EIF2B4Q9UI10 523 aaKnown RBP21.91■■□□□ 1.1
UPF3A-201ENST00000351487 ASB1Q9Y576 335 aa21.91■■□□□ 1.1
UPF3A-201ENST00000351487 E5RI56 91 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 HNRNPRO43390 633 aaKnown RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 AKAP10O43572 662 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 INHAP05111 366 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 IRF1P10914 325 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 CLCN7P51798 805 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 TGFBIQ15582 683 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 PACRGLQ8N7B6 248 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 OR2T11Q8NH01 316 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 CD99L2Q8TCZ2 262 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 DDI1Q8WTU0 396 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 TMEM125Q96AQ2 219 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 SLC45A3Q96JT2 553 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 TEX37Q96LM6 180 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 RIC8BQ9NVN3 520 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 CD274Q9NZQ7 290 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 TYW5A2RUC4 315 aaKnown RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 YBX1P67809 324 aaKnown RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 CACNG1Q06432 222 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 NADK2Q4G0N4 442 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ISLR2Q6UXK2 745 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ZBTB49Q6ZSB9 765 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 PTRH1Q86Y79 214 aaKnown RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 SEZ6LQ9BYH1 1024 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 RBM38Q9H0Z9 239 aaKnown RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 HMX1Q9NP08 348 aaPredicted RBP21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ZIM2Q9NZV7 527 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF711Q9Y462 761 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ST14Q9Y5Y6 855 aa21.9■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF106Q9H2Y7 1883 aaKnown RBP21.89■■□□□ 1.09
UPF3A-201ENST00000351487 C2orf78A6NCI8 922 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 ARPC2O15144 300 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 HTRA2O43464 458 aaPredicted RBP21.89■■□□□ 1.09
UPF3A-201ENST00000351487 LATS1O95835 1130 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 PRKCQQ04759 706 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 LSAMPQ13449 338 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 NFYCQ13952 458 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 PTPRRQ15256 657 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 ADRM1Q16186 407 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 TBCELQ5QJ74 424 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 INTS11Q5TA45 600 aaKnown RBP21.89■■□□□ 1.09
UPF3A-201ENST00000351487 CLSTN3Q9BQT9 956 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 ANKRD60Q9BZ19 345 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 AGPAT4Q9NRZ5 378 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 DHRS7Q9Y394 339 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 PKP3Q9Y446 797 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 PCDHB1Q9Y5F3 818 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 SCN8AQ9UQD0 1980 aa21.89■■□□□ 1.09
UPF3A-201ENST00000351487 SLC22A3O75751 556 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ABLIM3O94929 683 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ETS2P15036 469 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 PSMA4P25789 261 aaKnown RBP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 HMGCLP35914 325 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ALDH7A1P49419 539 aaKnown RBP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 TWF1Q12792 350 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 SLC5A9Q2M3M2 681 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 SPPL2CQ8IUH8 684 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 TMEM199Q8N511 208 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ZNF461Q8TAF7 563 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 FAM110BQ8TC76 370 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 MAGEE1Q9HCI5 957 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 DUS2Q9NX74 493 aaKnown RBP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 EGFL7Q9UHF1 273 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 LEF1Q9UJU2 399 aaPredicted RBP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 OR4F21O95013 312 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 CKMT2P17540 419 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 MZF1P28698 734 aaPredicted RBP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 NR1H2P55055 460 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 NOGQ13253 232 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 PCBP2Q15366 365 aaKnown RBP eCLIP21.88■■□□□ 1.09
UPF3A-201ENST00000351487 NHSL2Q5HYW2 709 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 CERS6Q6ZMG9 384 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 TAS2R42Q7RTR8 314 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ADGRG5Q8IZF4 528 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ESAMQ96AP7 390 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 VPS33AQ96AX1 596 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ACOX2Q99424 681 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 GRIP2Q9C0E4 1043 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 ALG2Q9H553 416 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 FNDC3AQ9Y2H6 1198 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms