RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPS6KA2Q15349 733 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF470Q6ECI4 717 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 BPIFB1Q8TDL5 484 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 NTAN1Q96AB6 310 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 NODALQ96S42 347 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 SLC9A7Q96T83 725 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 SMURF2Q9HAU4 748 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 NEK6Q9HC98 313 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 EXD2Q9NVH0 621 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 FAM118AQ9NWS6 357 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF99A8MXY4 864 aaPredicted RBP18.5■□□□□ 0.55
SCARF1-202ENST00000348987 NOBOXO60393 691 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 ITIH1P19827 911 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 HRH2P25021 359 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 SEPHS1P49903 392 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CLCNKBP51801 687 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CD47Q08722 323 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 SCAPQ12770 1279 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 FAM209AQ5JX71 171 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 PKN3Q6P5Z2 889 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 GALNT13Q8IUC8 556 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CNTN4Q8IWV2 1026 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 DCP1BQ8IZD4 617 aaKnown RBP18.5■□□□□ 0.55
SCARF1-202ENST00000348987 ELMOD1Q8N336 334 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 LPPQ93052 612 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 UBXN10Q96LJ8 280 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 TEKT5Q96M29 485 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 MOV10Q9HCE1 1003 aaKnown RBP18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CPNE5Q9HCH3 593 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 RGS13O14921 159 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 RFPL2O75678 378 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 CAPN15O75808 1086 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 KCNK2O95069 426 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 GABARAPO95166 117 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 CPB1P15086 417 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 KCNC1P48547 511 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 IST1P53990 364 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 SH3BP2P78314 561 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 CDC20Q12834 499 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF789Q5FWF6 425 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 PAGE3Q5JUK9 113 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 PPP2R2DQ66LE6 453 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 LAIR2Q6ISS4 152 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 LINC00299Q6ZSB3 139 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 PAGE2Q7Z2X7 111 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 KDELC2Q7Z4H8 507 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 RBM23Q86U06 439 aaKnown RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 OR13J1Q8NGT2 312 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 DPF3Q92784 378 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 DACH2Q96NX9 599 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 WDCPQ9H6R7 721 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 EVLQ9UI08 416 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 PIP5K1BO14986 540 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 SLC22A1O15245 554 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 MAGP20916 626 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 SERPINB10P48595 397 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 FOXA1P55317 472 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 EMX1Q04741 257 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 GALNT1Q10472 559 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 AASDHQ4L235 1098 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 AGAP9Q5VTM2 703 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 ANKRD34AQ69YU3 496 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 NAPEPLDQ6IQ20 393 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 ANKRD49Q8WVL7 239 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 GAD1Q99259 594 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 TRIM54Q9BYV2 358 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 AMBRA1Q9C0C7 1298 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 RNF38Q9H0F5 515 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 SIK2Q9H0K1 926 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 MIOSQ9NXC5 875 aa18.49■□□□□ 0.55
SCARF1-202ENST00000348987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-202ENST00000348987 A0A1W2PQ67 120 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TNFRSF10AO00220 468 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 SEC24AO95486 1093 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 DLGAP3O95886 979 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 ENO2P09104 434 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 IMPDH1P20839 514 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 POLD2P49005 469 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 CDC42EP1Q00587 391 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 PAN2Q504Q3 1202 aaKnown RBP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 UBE2UQ5VVX9 321 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 PDZD4Q76G19 769 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 C14orf80Q86SX3 495 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TLK2Q86UE8 772 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 RIMKLAQ8IXN7 391 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 EPS8L2Q9H6S3 715 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 SLC52A3Q9NQ40 469 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TESMINQ9Y4I5 508 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 PDCD11Q14690 1871 aaKnown RBP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TTC34A8MYJ7 566 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 HHLA1C9JL84 531 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 CHRNA1P02708 482 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 HGFP14210 728 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 PPP5CP53041 499 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 DIO3P55073 304 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 NCS1P62166 190 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms