RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KIAA1191Q96A73 305 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ISG20Q96AZ6 181 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FEM1CQ96JP0 617 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 UROC1Q96N76 676 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF599Q96NL3 588 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CAAP1Q9H8G2 361 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 AGPAT4Q9NRZ5 378 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PLK2Q9NYY3 685 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 A0A1W2PQ45 241 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 A0A1W2PQY0 241 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF840PA6NDX5 716 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MOXD2PA6NHM9 499 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 H3BNH8 94 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 TMEM189-UBE2V1I3L0A0 370 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 AP3B1O00203 1094 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ANKRD28O15084 1053 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ACSL4O60488 711 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF821O75541 412 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SRP72O76094 671 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SNUPNO95149 360 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RTN3O95197 1032 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SNAP29O95721 258 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 NAT2P11245 290 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CASP2P42575 452 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GSK3BP49841 420 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MTPNP58546 118 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GPR17Q13304 367 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 C5orf22Q49AR2 442 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 TIGD2Q4W5G0 525 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 NANOGP8Q6NSW7 305 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FUT10Q6P4F1 479 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF551Q7Z340 670 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GLT6D1Q7Z4J2 308 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 DHFR2Q86XF0 187 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MFN1Q8IWA4 741 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ATP6V0D2Q8N8Y2 350 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FAM47BQ8NA70 645 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SREK1Q8WXA9 508 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 DUS3LQ96G46 650 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FUBP3Q96I24 572 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PSKH2Q96QS6 385 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 C17orf80Q9BSJ5 609 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FBXO44Q9H4M3 255 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 NANOGQ9H9S0 305 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CCM2LQ9NUG4 571 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MID2Q9UJV3 735 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RNF112Q9ULX5 631 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CDC14AQ9UNH5 594 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CCL27Q9Y4X3 112 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RAI2Q9Y5P3 530 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ANKRD66B4E2M5 251 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 AKAP10O43572 662 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 KLK8O60259 260 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 KERAO60938 352 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 NDST3O95803 873 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 EFEMP2O95967 443 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FAM58BPP0C7Q3 252 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 G6PDP11413 515 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CDK4P11802 303 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PCNAP12004 261 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RPL5P46777 297 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CCT8P50990 548 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PHC1P78364 1004 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PLOD1Q02809 727 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 STX5Q13190 355 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 LAPTM5Q13571 262 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF235Q14590 738 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PTGR1Q14914 329 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PLCL1Q15111 1095 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PHKG1Q16816 387 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GEN1Q17RS7 908 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PARP15Q460N3 678 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GTDC1Q4AE62 458 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 LRRC73Q5JTD7 316 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 C6orf136Q5SQH8 315 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RNF219Q5W0B1 726 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZFP1Q6P2D0 407 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SBSNQ6UWP8 590 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CAMK1DQ8IU85 385 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ADGRG2Q8IZP9 1017 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 AHI1Q8N157 1196 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 OR2T34Q8NGX1 318 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 OR2T3Q8NH03 318 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 LINGO1Q96FE5 620 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ITCHQ96J02 903 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CLSTN3Q9BQT9 956 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SLC25A23Q9BV35 468 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 EML4Q9HC35 981 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 TLR8Q9NR97 1041 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 AASSQ9UDR5 926 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ZMYM5Q9UJ78 669 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CA12O43570 354 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 KDELR3O43731 214 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 GUCA1CO95843 209 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 EOMESO95936 686 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 ASLP04424 464 aa5.97□□□□□ -1.45
CLCN3-201ENST00000347613 CYBBP04839 570 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms