RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TGM5O43548 720 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 ZNF37AP17032 561 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 IHHQ14623 411 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 REP15Q6BDI9 236 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 NET1Q7Z628 596 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SEC16AO15027 2179 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 CEACAM7Q14002 265 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 FRG1Q14331 258 aaKnown RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 KRT72Q14CN4 511 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 LRRC66Q68CR7 880 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SERPINA13PQ6UXR4 307 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 ZNF621Q6ZSS3 439 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 PGBD3Q8N328 593 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 CCDC138Q96M89 665 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 COPS8Q99627 209 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 DPY30Q9C005 99 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 AP4S1Q9Y587 144 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SDHDO14521 159 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 LATO43561 262 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 RFX3P48380 749 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 CCNHP51946 323 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 STC1P52823 247 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 ACTR3P61158 418 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 MEF2AQ02078 507 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SLC2A7Q6PXP3 512 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 SH2D5Q6ZV89 423 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 CCT7Q99832 543 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 STX18Q9P2W9 335 aaKnown RBP13.18□□□□□ -0.3
CASC4-202ENST00000345795 ZNF711Q9Y462 761 aa13.18□□□□□ -0.3
CASC4-202ENST00000345795 CDK14O94921 469 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 MSH3P20585 1137 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 ARCN1P48444 511 aaKnown RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 FOLH1Q04609 750 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 LMAN2Q12907 356 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 BIRC2Q13490 618 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ACAP2Q15057 778 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 CANT1Q8WVQ1 401 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 TSGA13Q96PP4 275 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 VTI1BQ9UEU0 232 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 TMEM114B3SHH9 223 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RAD51BO15315 384 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ADH1AP07327 375 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 CYP4B1P13584 511 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 SLC18A1P54219 525 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 SEC13P55735 322 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 FAM189BP81408 668 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RIPK1Q13546 671 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 GK3PQ14409 553 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 ANO7Q6IWH7 933 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 TMEM214Q6NUQ4 689 aaKnown RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 APBB2Q92870 758 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RELTQ969Z4 430 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 DNAJC15Q9Y5T4 150 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 FAM186AA6NE01 2351 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 STK25O00506 426 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 TBC1D4O60343 1298 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ULK1O75385 1050 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 CDH15P55291 814 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 NEDD8Q15843 81 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ZNF284Q2VY69 593 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 TECRLQ5HYJ1 363 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ZNF549Q6P9A3 640 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RP9Q8TA86 221 aaKnown RBP13.17□□□□□ -0.3
CASC4-202ENST00000345795 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 EXD2Q9NVH0 621 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 RIC8BQ9NVN3 520 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 ASB1Q9Y576 335 aa13.17□□□□□ -0.3
CASC4-202ENST00000345795 DIRAS1O95057 198 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms