RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 LIMK2P53671 638 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 CMC1Q7Z7K0 106 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 SNX32Q86XE0 403 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 MFSD3Q96ES6 412 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 C3orf14Q9HBI5 128 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 KLHL20Q9Y2M5 609 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 MAPKAPK3Q16644 382 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 C16orf62Q7Z3J2 963 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC22A18Q96BI1 424 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 TUBGCP5Q96RT8 1024 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 RIOK2Q9BVS4 552 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC2A11Q9BYW1 496 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 OR6A2O95222 327 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 STK19P49842 368 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 ACAP2Q15057 778 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 KCTD19Q17RG1 926 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 TMEM25Q86YD3 366 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 SPPL3Q8TCT6 385 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 USP54Q70EL1 1684 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 J3KR12 359 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 PDHA1P08559 390 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 NMBRP28336 390 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SERINC3Q13530 473 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SULT1C3Q6IMI6 304 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 GPR180Q86V85 440 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 ATG16L2Q8NAA4 619 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TBX21Q9UL17 535 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 PRMT3O60678 531 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 MTX2O75431 263 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 ERN1O75460 977 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC35G6P0C7Q6 338 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CRHR1P34998 444 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TJAP1Q5JTD0 557 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TMEM130Q8N3G9 435 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 PPCDCQ96CD2 204 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 ARHGAP9Q9BRR9 750 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 HEBP1Q9NRV9 189 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 ZDHHC3Q9NYG2 299 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SLCO3A1Q9UIG8 710 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 M0QZQ0 153 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CLDN4O14493 209 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 PCSK2P16519 638 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 IL1R2P27930 398 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CHRNA4P43681 627 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CSTF1Q05048 431 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TRAF2Q12933 501 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 AADATQ8N5Z0 425 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 LRRN4CLQ8ND94 238 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SPOCK2Q92563 424 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TPD52L3Q96J77 140 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CLSTN3Q9BQT9 956 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 GSDMCQ9BYG8 508 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 ANGPT4Q9Y264 503 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 TRAFD1O14545 582 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 POU1F1P28069 291 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 CTSOP43234 321 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 Q8N9G6 341 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 SEMA3GQ9NS98 782 aa16.24■□□□□ 0.19
SMARCA4-201ENST00000344626 PPIBP23284 216 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ASTE1Q2TB18 679 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TCEAL4Q96EI5 215 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 CCT7Q99832 543 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ATG10Q9H0Y0 220 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 BTRCQ9Y297 605 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 NPC1O15118 1278 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A9O60656 530 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 FKBP6O75344 327 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 STC2O76061 302 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 CLDN9O95484 217 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 IDO1P14902 403 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A6P19224 532 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A1P22309 533 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A4P22310 534 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A3P35503 534 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A5P35504 534 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 SERPINB10P48595 397 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 EIF4HQ15056 248 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TBCELQ5QJ74 424 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A7Q9HAW7 530 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A10Q9HAW8 530 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UGT1A8Q9HAW9 530 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 GKP32189 559 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 MPP1Q00013 466 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 STX4Q12846 297 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 LRIG1Q96JA1 1093 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 BDH2Q9BUT1 245 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 AK5Q9Y6K8 562 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 PRAMEF11O60813 436 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 JMJD7P0C870 316 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms