RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PCDHA9Q9Y5H5 950 aa21.19■□□□□ 0.98
CCDC38-201ENST00000344280 H0Y626 953 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 PLOD2O00469 737 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 SNX2O60749 519 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 TBL1XO60907 577 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 PSMC3P17980 439 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 CCL23P55773 120 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 RCAN2Q14206 197 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 LYSMD3Q7Z3D4 306 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 ARMC1Q9NVT9 282 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 IL17CQ9P0M4 197 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 A0A1W2PP18 115 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 TPST1O60507 370 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 HSD17B1P14061 328 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 IL12AP29459 219 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 ERVPABLB-1P60509 514 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 PRKCQQ04759 706 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 KIAA1841Q6NSI8 718 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 LETMD1Q6P1Q0 360 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 TXNDC11Q6PKC3 985 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 IFNEQ86WN2 208 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 DIS3LQ8TF46 1054 aaKnown RBP21.18■□□□□ 0.98
CCDC38-201ENST00000344280 NUDT8Q8WV74 236 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 NMD3Q96D46 503 aaKnown RBP21.18■□□□□ 0.98
CCDC38-201ENST00000344280 ZFRQ96KR1 1074 aaKnown RBP21.18■□□□□ 0.98
CCDC38-201ENST00000344280 FEM1AQ9BSK4 669 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 TM6SF2Q9BZW4 377 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 P2RY12Q9H244 342 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 CCM2LQ9NUG4 571 aaPredicted RBP21.18■□□□□ 0.98
CCDC38-201ENST00000344280 AFF4Q9UHB7 1163 aaKnown RBP21.18■□□□□ 0.98
CCDC38-201ENST00000344280 VPS9D1Q9Y2B5 631 aa21.18■□□□□ 0.98
CCDC38-201ENST00000344280 SMIM31A0A1B0GVY4 71 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 H7C0S8 307 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 FZD6O60353 706 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 VPS4BO75351 444 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 MLYCDO95822 493 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 MTHFD1P11586 935 aaKnown RBP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 CLCN4P51793 760 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 RHOAP61586 193 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 Q6ZSR9 355 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 GPRIN3Q6ZVF9 776 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ERMP1Q7Z2K6 904 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 TMEM150AQ86TG1 271 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 MFN1Q8IWA4 741 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 OR56A4Q8NGH8 313 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ZNF461Q8TAF7 563 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 GRIN3AQ8TCU5 1115 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ZUFSPQ96AP4 578 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 TMEM125Q96AQ2 219 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 MYRFLQ96LU7 910 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 USP22Q9UPT9 525 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 YIPF1Q9Y548 306 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ANAPC1Q9H1A4 1944 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 SAC3D1A6NKF1 404 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ARPC2O15144 300 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 VILLO15195 856 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 HOXA2O43364 376 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 STAMBPO95630 424 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 HOXD10P28358 340 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 CASP2P42575 452 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 APOFQ13790 326 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 NFYCQ13952 458 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 SLC5A9Q2M3M2 681 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 FUT11Q495W5 492 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 TBCELQ5QJ74 424 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 PRMT9Q6P2P2 845 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 RBM44Q6ZP01 1051 aaKnown RBP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ZBTB49Q6ZSB9 765 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 SPATA19Q7Z5L4 167 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 CAMK1DQ8IU85 385 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 PXYLP1Q8TE99 480 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 TMEM74Q96NL1 305 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 EFHD1Q9BUP0 239 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 BOCQ9BWV1 1114 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 NUSAP1Q9BXS6 441 aaKnown RBP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 MRPS26Q9BYN8 205 aaKnown RBP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 GID8Q9NWU2 228 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 DUS2Q9NX74 493 aaKnown RBP21.17■□□□□ 0.98
CCDC38-201ENST00000344280 VPS51Q9UID3 782 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 ZNF711Q9Y462 761 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 BACE2Q9Y5Z0 518 aa21.17■□□□□ 0.98
CCDC38-201ENST00000344280 DHRS12A0PJE2 317 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 HTRA2O43464 458 aaPredicted RBP21.16■□□□□ 0.98
CCDC38-201ENST00000344280 PQBP1O60828 265 aaKnown RBP21.16■□□□□ 0.98
CCDC38-201ENST00000344280 MYCP01106 439 aaPredicted RBP21.16■□□□□ 0.98
CCDC38-201ENST00000344280 ITGB6P18564 788 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 PTGER3P43115 390 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 HTR6P50406 440 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 SMAD3P84022 425 aaKnown RBP21.16■□□□□ 0.98
CCDC38-201ENST00000344280 TAF12Q16514 161 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 TIGD2Q4W5G0 525 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 C6orf136Q5SQH8 315 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 DEFB128Q7Z7B8 93 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 CARM1Q86X55 608 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 KIAA2013Q8IYS2 634 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 RNF168Q8IYW5 571 aaPredicted RBP21.16■□□□□ 0.98
CCDC38-201ENST00000344280 ANKFN1Q8N957 763 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 IGSF21Q96ID5 467 aa21.16■□□□□ 0.98
CCDC38-201ENST00000344280 EPB41L1Q9H4G0 881 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms