RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ADCY8P40145 1251 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 PDE1BQ01064 536 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 RHDQ02161 417 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 VAC14Q08AM6 782 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 CHRNA6Q15825 494 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 KCTD19Q17RG1 926 aaPredicted RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 ZNF648Q5T619 568 aaPredicted RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 PAPD7Q5XG87 772 aaKnown RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 FAM46DQ8NEK8 389 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 GPR156Q8NFN8 814 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 OR52K1Q8NGK4 314 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 VPS35Q96QK1 796 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 C19orf43Q9BQ61 176 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 PIH1D1Q9NWS0 290 aaKnown RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 ATXN10Q9UBB4 475 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 ZNHIT2Q9UHR6 403 aa17.81■□□□□ 0.44
USF2-202ENST00000343550 PCYT1BQ9Y5K3 369 aaPredicted RBP17.81■□□□□ 0.44
USF2-202ENST00000343550 GLYATL1P3A0A0U1RQE8 302 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 D6RAR5 112 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 TMX2-CTNND1H3BSU7 103 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 PLD2O14939 933 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A9O60656 530 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A6P19224 532 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A1P22309 533 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A4P22310 534 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A3P35503 534 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A5P35504 534 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 COILP38432 576 aaPredicted RBP17.8■□□□□ 0.44
USF2-202ENST00000343550 GRIA1P42261 906 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 LMAN1P49257 510 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 CTBSQ01459 385 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 TAF1BQ53T94 588 aaPredicted RBP17.8■□□□□ 0.44
USF2-202ENST00000343550 OGFOD3Q6PK18 319 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 FAM151BQ6UXP7 276 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 ADGRG6Q86SQ4 1221 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 ZNF843Q8N446 348 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 SNRNP27Q8WVK2 155 aaKnown RBP17.8■□□□□ 0.44
USF2-202ENST00000343550 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 STRADBQ9C0K7 418 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 LRRN3Q9H3W5 708 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 RMI1Q9H9A7 625 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A7Q9HAW7 530 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A10Q9HAW8 530 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 UGT1A8Q9HAW9 530 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 EPB41L5Q9HCM4 733 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 APPL1Q9UKG1 709 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 PLEKHM1Q9Y4G2 1056 aa17.8■□□□□ 0.44
USF2-202ENST00000343550 ATMQ13315 3056 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 NUAK1O60285 661 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 APRTP07741 180 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 GLB1P16278 677 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 ZNF8P17098 575 aaPredicted RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 AK4P27144 223 aaPredicted RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 CA5AP35218 305 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 INHBCP55103 352 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 CDH17Q12864 832 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 ILF3Q12906 894 aaKnown RBP eCLIP17.79■□□□□ 0.442e-8■□□□□ 11.3
USF2-202ENST00000343550 EIF3IQ13347 325 aaKnown RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 RAB11FIP2Q7L804 512 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 GALNT13Q8IUC8 556 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 FBXO39Q8N4B4 442 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 OR13C4Q8NGS5 318 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 ZNF398Q8TD17 642 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 WBP1Q96G27 269 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 OR2M4Q96R27 311 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 NAPGQ99747 312 aaPredicted RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 GSDMCQ9BYG8 508 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 OR2AG1Q9H205 316 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 SPATS2LQ9NUQ6 558 aaKnown RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 PRKAB1Q9Y478 270 aa17.79■□□□□ 0.44
USF2-202ENST00000343550 GCN1Q92616 2671 aaKnown RBP17.79■□□□□ 0.44
USF2-202ENST00000343550 ZNF140P52738 457 aaPredicted RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 XIAPP98170 497 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 CFHR1Q03591 330 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 POU6F1Q14863 301 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 TRIP13Q15645 432 aaPredicted RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 KHDC1Q4VXA5 237 aaKnown RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 CERCAMQ5T4B2 595 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 CCDC137Q6PK04 289 aaKnown RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 PHYKPLQ8IUZ5 450 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 CCNJLQ8IV13 435 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 C17orf53Q8N3J3 647 aaPredicted RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 Q8N9G6 341 aaPredicted RBP17.78■□□□□ 0.44
USF2-202ENST00000343550 DNAAF3Q8N9W5 541 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 TMEM74Q96NL1 305 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 DPEP2Q9H4A9 486 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 CASS4Q9NQ75 786 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 FKBPLQ9UIM3 349 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 SAR1BQ9Y6B6 198 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 KIF26BQ2KJY2 2108 aa17.78■□□□□ 0.44
USF2-202ENST00000343550 CTAGE9A4FU28 777 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 MROH6A6NGR9 719 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 GPR89AB7ZAQ6 455 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 CHUKO15111 745 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 FANCGO15287 622 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 GPR39O43194 453 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 GRID2O43424 1007 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 VEGFDO43915 354 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 NOBOXO60393 691 aa17.77■□□□□ 0.44
USF2-202ENST00000343550 MTX2O75431 263 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms