RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CD160O95971 181 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 COX4I1P13073 169 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PORP16435 677 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 NRG1Q02297 640 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 MSLNQ13421 630 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 KLHL35Q6PF15 583 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 SCIMPQ6UWF3 145 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 RBM44Q6ZP01 1051 aaKnown RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ADGRG6Q86SQ4 1221 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 DCAF4L2Q8NA75 395 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CALML6Q8TD86 181 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ANKRD49Q8WVL7 239 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 RSPRY1Q96DX4 576 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 OR52B2Q96RD2 323 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 GPR21Q99679 349 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 MGME1Q9BQP7 344 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 BOCQ9BWV1 1114 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CDH19Q9H159 772 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 FAF1Q9UNN5 650 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 COQ6Q9Y2Z9 468 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 BPTFQ12830 3046 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 GREB1Q4ZG55 1949 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 TULP3O75386 442 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 MOSPD3O75425 235 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 GDI1P31150 447 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CDKN2DP55273 166 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 NME5P56597 212 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 BTKQ06187 659 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 DLX2Q07687 328 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CCDC153Q494R4 210 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ELMSAN1Q6PJG2 1045 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 B3GNT6Q6ZMB0 384 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 HTR3DQ70Z44 454 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 SIDT2Q8NBJ9 832 aaKnown RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 OR2AP1Q8NGE2 309 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 FEM1CQ96JP0 617 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 HBEGFQ99075 208 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 DEC1Q9P2X7 70 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 G3V2L1 256 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CRCPO75575 148 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 EFEMP2O95967 443 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PRLP01236 227 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 IDO1P14902 403 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CD72P21854 359 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 HNF1BP35680 557 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 METAP1P53582 386 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 SLC7A9P82251 487 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 KLF10Q13118 480 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
COL18A1-201ENST00000342220 TRIP10Q15642 601 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PFKFB4Q16877 469 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 EPGNQ6UW88 154 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 FBXW8Q8N3Y1 598 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 PTTG2Q9NZH5 202 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 CROTQ9UKG9 612 aa12.95□□□□□ -0.34
COL18A1-201ENST00000342220 NUMA1Q14980 2115 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 TXNDC9O14530 226 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 LEFTY1O75610 366 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 SIX3O95343 332 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ADH5P11766 374 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 SERPINB5P36952 375 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ARCN1P48444 511 aaKnown RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 PAQR3Q6TCH7 311 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 CILP2Q8IUL8 1156 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 BPIFB1Q8TDL5 484 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 NUF2Q9BZD4 464 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 KLHL4Q9C0H6 718 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 WDR55Q9H6Y2 383 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 LHX3Q9UBR4 397 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 TSC2P49815 1807 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 BTN3A1O00481 513 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 EPHX1P07099 455 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 COL6A2P12110 1019 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 MPSTP25325 297 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 MAGEA12P43365 314 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 HSPA14Q0VDF9 509 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 DLG1Q12959 904 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ARTNQ5T4W7 220 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 CES5AQ6NT32 575 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 C22orf39Q6P5X5 142 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 GAB3Q8WWW8 586 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ZNF707Q96C28 371 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 LENG8Q96PV6 779 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 POMKQ9H5K3 350 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 HACD3Q9P035 362 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 GALPQ9UBC7 116 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 KRT87PA6NCN2 255 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms