RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.21
PMS1-201ENST00000342075 SLC17A9Q9BYT1 436 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 OR2AG1Q9H205 316 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 ACTL7BQ9Y614 415 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 PBLDP30039 288 aaPredicted RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 E2F5Q15329 346 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CLEC14AQ86T13 490 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 TCF12Q99081 682 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 BTBD1Q9H0C5 482 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CHRDQ9H2X0 955 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 IGSF5Q9NSI5 407 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 USP36Q9P275 1121 aaKnown RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 NCKAP1Q9Y2A7 1128 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 POM121BA6NF01 834 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 E5RI56 91 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 PRPF4O43172 522 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■■□□ 15.6
PMS1-201ENST00000342075 ZNF7P17097 686 aaPredicted RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 IGFALSP35858 605 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CLCN7P51798 805 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 RPS21P63220 83 aaKnown RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 CREB5Q02930 508 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 HSF5Q4G112 596 aaPredicted RBP13.72□□□□□ -0.21
PMS1-201ENST00000342075 FAM45BPQ6NSW5 357 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 PNCKQ6P2M8 343 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 CYP2U1Q7Z449 544 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 FAM45AQ8TCE6 357 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 FBRSQ9HAH7 460 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 TM7SF3Q9NS93 570 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 SENP1Q9P0U3 644 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 TLK1Q9UKI8 766 aa13.72□□□□□ -0.21
PMS1-201ENST00000342075 ZNF37AP17032 561 aaPredicted RBP13.71□□□□□ -0.21
PMS1-201ENST00000342075 ETV4P43268 484 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 KCNC1P48547 511 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
PMS1-201ENST00000342075 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 CES4AQ5XG92 561 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 USP30Q70CQ3 517 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 HORMAD1Q86X24 394 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 NRSN1Q8IZ57 195 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.21
PMS1-201ENST00000342075 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 GPR78Q96P69 363 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.21
PMS1-201ENST00000342075 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 ACOT9Q9Y305 439 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 PLLPQ9Y342 182 aa13.71□□□□□ -0.21
PMS1-201ENST00000342075 IGLV3-16A0A075B6K0 115 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 ZBTB14O43829 449 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.22
PMS1-201ENST00000342075 SBK3P0C264 359 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 SUOXP51687 545 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 SGCGQ13326 291 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 RNF187Q5TA31 235 aaPredicted RBP13.71□□□□□ -0.22
PMS1-201ENST00000342075 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 EEF1AKMT1Q8WVE0 214 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 FOXJ1Q92949 421 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 CENPTQ96BT3 561 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 PTERQ96BW5 349 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 C1QTNF2Q9BXJ5 285 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 SMOXQ9NWM0 555 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.22
PMS1-201ENST00000342075 NEMP2A6NFY4 417 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 LATO43561 262 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 FSBPO95073 299 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 SEMA4FO95754 770 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 FUCA1P04066 466 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 ATP1B2P14415 290 aaPredicted RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 KCNA4P22459 653 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 CCR7P32248 378 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 CRHR1P34998 444 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 NSG1P42857 185 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 TMEM115Q12893 351 aaPredicted RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 LAYNQ6UX15 382 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 VRK3Q8IV63 474 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 EXT2Q93063 718 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 MRPL40Q9NQ50 206 aaKnown RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 ASMTLO95671 621 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 ESR1P03372 595 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 MSH3P20585 1137 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 DPTQ07507 201 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 BOP1Q14137 746 aaKnown RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
PMS1-201ENST00000342075 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
PMS1-201ENST00000342075 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms