RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 DET1Q7L5Y6 550 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 RAVER1Q8IY67 606 aaKnown RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 NKAPQ8N5F7 415 aaKnown RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 SGF29Q96ES7 293 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 UBXN10Q96LJ8 280 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 MKRN2Q9H000 416 aaKnown RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 WNT16Q9UBV4 365 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 CA14Q9ULX7 337 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 PRSS21Q9Y6M0 314 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 AGAP14A8MT82 685 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 SLC25A14O95258 325 aaPredicted RBP17.15■□□□□ 0.34
CLDN4-201ENST00000340958 OR56A5P0C7T3 313 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 TFEBP19484 476 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 GPR1P46091 355 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 IL2P60568 153 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 TIAL1Q01085 375 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLDN4-201ENST00000340958 STX3Q13277 289 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 PCLAFQ15004 111 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 CYP2U1Q7Z449 544 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 SIX5Q8N196 739 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 DTX3LQ8TDB6 740 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 CCDC97Q96F63 343 aaPredicted RBP17.15■□□□□ 0.34
CLDN4-201ENST00000340958 SIPA1Q96FS4 1042 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 PANX3Q96QZ0 392 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 ELAC2Q9BQ52 826 aaKnown RBP17.15■□□□□ 0.34
CLDN4-201ENST00000340958 LRFN3Q9BTN0 628 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 TSSK1BQ9BXA7 367 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 ALG9Q9H6U8 611 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 NCKAP1Q9Y2A7 1128 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 OAS3Q9Y6K5 1087 aaKnown RBP17.15■□□□□ 0.34
CLDN4-201ENST00000340958 BPTFQ12830 3046 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 SCN8AQ9UQD0 1980 aa17.15■□□□□ 0.34
CLDN4-201ENST00000340958 A0A1W2PQF6 199 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 KRBA1A5PL33 1030 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 PRR23AA6NEV1 266 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 PRR33A8MZF0 331 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 F8W8V4 182 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 INPP4BO15327 924 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 MTX2O75431 263 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 COL9A1P20849 921 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 ZSCAN26Q16670 478 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 AGBL4Q5VU57 503 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 KIAA1324Q6UXG2 1013 aaKnown RBP17.14■□□□□ 0.34
CLDN4-201ENST00000340958 ZYG11AQ6WRX3 759 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 MACC1Q6ZN28 852 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 ZCCHC23Q6ZST2 131 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 OR14C36Q8NHC7 312 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 BTN2A2Q8WVV5 523 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 GPR78Q96P69 363 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 SLC6A17Q9H1V8 727 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 SLCO1B3Q9NPD5 702 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 SMOXQ9NWM0 555 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 SIRPGQ9P1W8 387 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 NFKBIL1Q9UBC1 381 aaPredicted RBP17.14■□□□□ 0.34
CLDN4-201ENST00000340958 GALPQ9UBC7 116 aa17.14■□□□□ 0.34
CLDN4-201ENST00000340958 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.34
CLDN4-201ENST00000340958 WDFY4Q6ZS81 3184 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 TM7SF2O76062 418 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 ATP1B2P14415 290 aaPredicted RBP17.14■□□□□ 0.33
CLDN4-201ENST00000340958 CD9P21926 228 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 SFSWAPQ12872 951 aaKnown RBP17.14■□□□□ 0.33
CLDN4-201ENST00000340958 HSF5Q4G112 596 aaPredicted RBP17.14■□□□□ 0.33
CLDN4-201ENST00000340958 LDLRAP1Q5SW96 308 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 CPNE9Q8IYJ1 553 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 EXT2Q93063 718 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 GLYATL1Q969I3 302 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 LINGO1Q96FE5 620 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 ARHGEF3Q9NR81 526 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
CLDN4-201ENST00000340958 MED16Q9Y2X0 877 aa17.14■□□□□ 0.33
CLDN4-201ENST00000340958 ATG2BQ96BY7 2078 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 IGLON5A6NGN9 336 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 G3V2L1 256 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 KLF11O14901 512 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 AP1G1O43747 822 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 CD1DP15813 335 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 RGS4P49798 205 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 CLCN7P51798 805 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 ATP6V0D1P61421 351 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 ASPHQ12797 758 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 CCINQ13939 588 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 TTLL9Q3SXZ7 439 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 PHYKPLQ8IUZ5 450 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 CD200R1Q8TD46 325 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 GRAMD1AQ96CP6 724 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 SPATS2LQ9NUQ6 558 aaKnown RBP17.13■□□□□ 0.33
CLDN4-201ENST00000340958 SCML1Q9UN30 329 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 DHRS7Q9Y394 339 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 F5P12259 2224 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 KMT2EQ8IZD2 1858 aa17.13■□□□□ 0.33
CLDN4-201ENST00000340958 ZNF106Q9H2Y7 1883 aaKnown RBP17.13■□□□□ 0.33
CLDN4-201ENST00000340958 TCRBV21S2A2A0A5A6 115 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 BTN3A1O00481 513 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZBTB14O43829 449 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms