RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 KCTD11Q693B1 232 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 BTLAQ7Z6A9 289 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 OR6K2Q8NGY2 324 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 MAPK15Q8TD08 544 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 RPL10LQ96L21 214 aaKnown RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 COG4Q9H9E3 785 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 HELZP42694 1942 aaKnown RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 LOC105371267A0A1B0GV96 52 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 ZSCAN5BA6NJL1 495 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 NEMP1O14524 444 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 CLDN11O75508 207 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 PIRTP0C851 137 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 RALBP11234 206 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 ZNF182P17025 639 aaPredicted RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 XRCC1P18887 633 aaPredicted RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 CD70P32970 193 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 MAPKAPK2P49137 400 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 SERPINB9P50453 376 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 ESRRGP62508 458 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 DNASE1L3Q13609 305 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 DUSP6Q16828 381 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 PUS10Q3MIT2 529 aaKnown RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 C5orf22Q49AR2 442 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 CCDC58Q4VC31 144 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 AARS2Q5JTZ9 985 aaKnown RBP14.98□□□□□ -0.01
BRAT1-201ENST00000340611 TIFAQ96CG3 184 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 OR52B2Q96RD2 323 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 TASP1Q9H6P5 420 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 VPS28Q9UK41 221 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 TRHDEQ9UKU6 1024 aa14.98□□□□□ -0.01
BRAT1-201ENST00000340611 NEDD8-MDP1E9PL57 170 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 PRAMEF11O60813 436 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TMCC2O75069 709 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 GLRA3O75311 464 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ESRRBO95718 433 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 MAGEA3P43357 314 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 THOP1P52888 689 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 EPHA5P54756 1037 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ABCE1P61221 599 aaKnown RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 DLX2Q07687 328 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 POU6F1Q14863 301 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 PARP15Q460N3 678 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TCEAL5Q5H9L2 206 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 IL23RQ5VWK5 629 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 PTAR1Q7Z6K3 402 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ZNF781Q8N8C0 355 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 SEMA3CQ99985 751 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CLK4Q9HAZ1 481 aaKnown RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CHRAC1Q9NRG0 131 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 DNAJC28Q9NX36 388 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ATG2BQ96BY7 2078 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 MTSS1O43312 755 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ALDH3B2P48448 385 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CSE1LP55060 971 aaKnown RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 RAB15P59190 212 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ARF5P84085 180 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 FLOT2Q14254 428 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 NDUFA5Q16718 116 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ANO4Q32M45 955 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TIGD7Q6NT04 549 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CCDC81Q6ZN84 652 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TMEM26Q6ZUK4 368 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 HTR3DQ70Z44 454 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TAS2R42Q7RTR8 314 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 SNX32Q86XE0 403 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 GRAMD2AQ8IUY3 354 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 SPNS2Q8IVW8 549 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 LILRA2Q8N149 483 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 MYO1HQ8N1T3 1032 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 MCUQ8NE86 351 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 CDRT15Q96T59 188 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TMEM79Q9BSE2 394 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 TP63Q9H3D4 680 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 WDR55Q9H6Y2 383 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 PDFQ9HBH1 243 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 BCAP29Q9UHQ4 241 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 ERGIC3Q9Y282 383 aa14.97□□□□□ -0.01
BRAT1-201ENST00000340611 FCF1Q9Y324 198 aaKnown RBP14.97□□□□□ -0.01
BRAT1-201ENST00000340611 MMP2P08253 660 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 TCN1P20061 433 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 RPL26P61254 145 aaKnown RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 IFITM2Q01629 132 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 ASTLQ6HA08 431 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 LILRB4Q8NHJ6 448 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 MFSD3Q96ES6 412 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 MRGPRX2Q96LB1 330 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 FCRL3Q96P31 734 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 PKP2Q99959 881 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 FEM1AQ9BSK4 669 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 STN1Q9H668 368 aaKnown RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 RETREG1Q9H6L5 497 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 ANKRD36A6QL64 1941 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 STX16-NPEPL1H3BU86 382 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 BNIP3LO60238 219 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 H6PDO95479 791 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 CD160O95971 181 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 EPHA3P29320 983 aa14.96□□□□□ -0.01
BRAT1-201ENST00000340611 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
BRAT1-201ENST00000340611 ABCG1P45844 678 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms