RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TARDBPQ13148 414 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYNE4-202ENST00000340477 PPP1R7Q15435 360 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 KHDC1Q4VXA5 237 aaKnown RBP18.92■□□□□ 0.62
SYNE4-202ENST00000340477 CCDC38Q502W7 563 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 TTC27Q6P3X3 843 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 TAS2R42Q7RTR8 314 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 NXPE1Q8N323 547 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 ARL14Q8N4G2 192 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 DCBLD1Q8N8Z6 715 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 Q8N9G6 341 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-202ENST00000340477 NXPE2Q96DL1 559 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 CAPZA3Q96KX2 299 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 COPS8Q99627 209 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 ZMYND15Q9H091 742 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 DNAJC16Q9Y2G8 782 aa18.92■□□□□ 0.62
SYNE4-202ENST00000340477 CHD8Q9HCK8 2581 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 KIR2DS5A0A0G2JLQ3 304 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 A0A0G2JNG1 304 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CCDC78A2IDD5 438 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 KLHL33A6NCF5 533 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 MROH6A6NGR9 719 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 PDZK1P1A8MUH7 402 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 KIR2DS3K7RE56 304 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CCL22O00626 93 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CSO75390 466 aaKnown RBP18.91■□□□□ 0.62
SYNE4-202ENST00000340477 F3P13726 295 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 IDSP22304 550 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 SESN2P58004 480 aaPredicted RBP18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CACNG1Q06432 222 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 KIR2DS5Q14953 304 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CDCP2Q5VXM1 449 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 PAPD7Q5XG87 772 aaKnown RBP18.91■□□□□ 0.62
SYNE4-202ENST00000340477 SLC9B2Q86UD5 537 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 AMZ2Q86W34 360 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 NAGSQ8N159 534 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 GATA6Q92908 595 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 PEX13Q92968 403 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 CDKN2AIPNLQ96HQ2 116 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 TTC1Q99614 292 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 IL22Q9GZX6 179 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 VPS37BQ9H9H4 285 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 KCND1Q9NSA2 647 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 TBC1D29Q9UFV1 150 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 RIMKLBQ9ULI2 386 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 TCAF1Q9Y4C2 921 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 PCYT1BQ9Y5K3 369 aaPredicted RBP18.91■□□□□ 0.62
SYNE4-202ENST00000340477 ST14Q9Y5Y6 855 aa18.91■□□□□ 0.62
SYNE4-202ENST00000340477 DNMT3AQ9Y6K1 912 aaPredicted RBP18.91■□□□□ 0.62
SYNE4-202ENST00000340477 OR2AG2A6NM03 316 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 GRIA1P42261 906 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 GPR3P46089 330 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 NPY2RP49146 381 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 TERF1P54274 439 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 PRAMEP78395 509 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 FNBP1LQ5T0N5 605 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 TSTD2Q5T7W7 516 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 TMEM220Q6QAJ8 160 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 AFTPHQ6ULP2 937 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 DET1Q7L5Y6 550 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 SPRED1Q7Z699 444 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 C17orf82Q86X59 251 aaPredicted RBP18.9■□□□□ 0.62
SYNE4-202ENST00000340477 SFTPA2Q8IWL1 248 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 TRIM48Q8IWZ4 208 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 SFRP1Q8N474 314 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 RASGEF1AQ8N9B8 481 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 SLC37A2Q8TED4 501 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 PATE1Q8WXA2 126 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 SH3KBP1Q96B97 665 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 RUNDC3BQ96NL0 473 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 CNTNAP3BQ96NU0 1288 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 CNTNAP3Q9BZ76 1288 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 LRRN3Q9H3W5 708 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 FAM96AQ9H5X1 160 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 ACACBO00763 2458 aa18.9■□□□□ 0.62
SYNE4-202ENST00000340477 TMX2-CTNND1H3BSU7 103 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 ALDH4A1P30038 563 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 PBLDP30039 288 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-202ENST00000340477 PPARGP37231 505 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-202ENST00000340477 HALP42357 657 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 FASLGP48023 281 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 SEPT7Q16181 437 aaKnown RBP18.89■□□□□ 0.61
SYNE4-202ENST00000340477 MAP9Q49MG5 647 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 PCID2Q5JVF3 399 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 LYPLAL1Q5VWZ2 237 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 ZNF438Q7Z4V0 828 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 MARCH9Q86YJ5 346 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 ZNF547Q8IVP9 402 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 SLC38A3Q99624 504 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 PRDM8Q9NQV8 689 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 ZDHHC3Q9NYG2 299 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 RNF14Q9UBS8 474 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 RABGEF1Q9UJ41 708 aa18.89■□□□□ 0.61
SYNE4-202ENST00000340477 KNTC1P50748 2209 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 TRBV23OR9-2A0A075B6M9 112 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 AGAP14A8MT82 685 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 C1QTNF9BB2RNN3 333 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 D6RAR5 112 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 F8W8V4 182 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 POP7O75817 140 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms