RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 IQCHQ86VS3 1027 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 YIPF4Q9BSR8 244 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 COMMD4Q9H0A8 199 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 GLYATL1P3A0A0U1RQE8 302 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 OTOL1A6NHN0 477 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 NADKO95544 446 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 MAPK12P53778 367 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 CMC1Q7Z7K0 106 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 LCN9Q8WX39 176 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 FCRL2Q96LA5 508 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 AIFM2Q9BRQ8 373 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 A0A0J9YYE9 177 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 DHFRP00374 187 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 ALADP13716 330 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 UQCRC1P31930 480 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 FOLH1Q04609 750 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 TIGD2Q4W5G0 525 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 VITQ6UXI7 678 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 OTOP3Q7RTS5 596 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 C1orf216Q8TAB5 229 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 SETD7Q8WTS6 366 aaKnown RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 DIRAS2Q96HU8 199 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF226Q9NYT6 803 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 GPR89AB7ZAQ6 455 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 DDX3YO15523 660 aaKnown RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 KRT36O76013 467 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 GPR89BP0CG08 455 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 MAPK8P45983 427 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 RABGGTBP53611 331 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 HDDC3Q8N4P3 179 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 DNAAF1Q8NEP3 725 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 DLG3Q92796 817 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 RPL10LQ96L21 214 aaKnown RBP11.69□□□□□ -0.54
SHANK2-201ENST00000338508 FTHL17Q9BXU8 183 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 PCDHB11Q9Y5F2 797 aa11.69□□□□□ -0.54
SHANK2-201ENST00000338508 ANXA2P2A6NMY6 339 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 E2F3O00716 465 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 IL33O95760 270 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ANXA2P07355 339 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 COL6A1P12109 1028 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF8P17098 575 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 IDSP22304 550 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SLC7A1P30825 629 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ATAT1Q5SQI0 421 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 OR4C6Q8NH72 309 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 TBC1D10AQ9BXI6 508 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 MMADHCQ9H3L0 296 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 TRPV5Q9NQA5 729 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 PLA2G16P53816 162 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 BEND7Q8N7W2 519 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 BRF2Q9HAW0 419 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SNTG1Q9NSN8 517 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 IFT52Q9Y366 437 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 TAF10Q12962 218 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 GXYLT1Q4G148 440 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 UNC5BQ8IZJ1 945 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SYNPOQ8N3V7 929 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 MCFD2Q8NI22 146 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 HNRNPLLQ8WVV9 542 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 NXF3Q9H4D5 531 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 CCDC59Q9P031 241 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 B4DGG1 531 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 TRIM38O00635 465 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 B4GALT5O43286 388 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 CYP17A1P05093 508 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ITGA2BP08514 1039 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 AVPR1BP47901 424 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 NR0B1P51843 470 aaKnown RBP11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ADAM8P78325 824 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF234Q14588 700 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ZPBP2Q6X784 338 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 GRHL3Q8TE85 626 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 PORCNQ9H237 461 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 IRF6O14896 467 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SNAP91O60641 907 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 ALPPL2P10696 532 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 CD247P20963 164 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 SHMT1P34896 483 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 MAGEA12P43365 314 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 CCR10P46092 362 aa11.68□□□□□ -0.54
SHANK2-201ENST00000338508 PSEN1P49768 467 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms