RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 TLCD2A6NGC4 264 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 B4DGG1 531 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 AP3B1O00203 1094 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 LIFP15018 202 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 IDSP22304 550 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 PRLHRP49683 370 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 XIAPP98170 497 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 SLC1A5Q15758 541 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZSCAN23Q3MJ62 389 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 DRICH1Q6PGQ1 229 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 HMGCLL1Q8TB92 370 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZNF285Q96NJ3 590 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 AGAP2Q99490 1192 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 FERMT1Q9BQL6 677 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MRPL40Q9NQ50 206 aaKnown RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZNF624Q9P2J8 865 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 IL17BQ9UHF5 180 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP16-201ENST00000334352 MGAT4DA6NG13 374 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MIF4GDA9UHW6 222 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 AKR1B15C9JRZ8 316 aaPredicted RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 H3BMH7 237 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 SGTAO43765 313 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 UBXN7O94888 489 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 UGT1A3P35503 534 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 ZNF140P52738 457 aaPredicted RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 CLDN6P56747 220 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 CCL4L1Q8NHW4 92 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 HM13Q8TCT9 377 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 ADAMTS17Q8TE56 1095 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 DENND1AQ8TEH3 1009 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MIB2Q96AX9 1013 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 HAUS1Q96CS2 278 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 CRELD1Q96HD1 420 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 C17orf62Q9BQA9 187 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 NUDT22Q9BRQ3 303 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MAK16Q9BXY0 300 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 DPEP2Q9H4A9 486 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MRM3Q9HC36 420 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 IFNKQ9P0W0 207 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 ANKMY1Q9P2S6 941 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 PISDQ9UG56 409 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 CHKBQ9Y259 395 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 C1orf232A0A0U1RR37 186 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 EFCAB7A8K855 629 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 PHF2O75151 1096 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MAP3K6O95382 1288 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 MTHFD1P11586 935 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 ACTR1BP42025 376 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 ACTR1AP61163 376 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 GTF2H3Q13889 308 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 NAA25Q14CX7 972 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 SLC5A12Q1EHB4 618 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 TDRD12Q587J7 1177 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 CRB2Q5IJ48 1285 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 IGFL3Q6UXB1 125 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 NLRP9Q7RTR0 991 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 TMTC1Q8IUR5 882 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 LRRC57Q8N9N7 239 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 PTCD2Q8WV60 388 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 KIAA1143Q96AT1 154 aaPredicted RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 FICDQ9BVA6 458 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 EIF2B3Q9NR50 452 aaKnown RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 NLE1Q9NVX2 485 aaPredicted RBP6.27□□□□□ -1.41
USP16-201ENST00000334352 IMPACTQ9P2X3 320 aa6.27□□□□□ -1.41
USP16-201ENST00000334352 GOLGA6CA6NDK9 693 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 GOLGA6BA6NDN3 693 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 OR5K3A6NET4 321 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 MROH6A6NGR9 719 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 TMCO5BA8MYB1 307 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 GOLGA6DP0CG33 693 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 MYF5P13349 255 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 RORAP35398 523 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 SLC19A1P41440 591 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 EPHB1P54762 984 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 TMEM115Q12893 351 aaPredicted RBP6.26□□□□□ -1.41
USP16-201ENST00000334352 ILF2Q12905 390 aaKnown RBP6.26□□□□□ -1.41
USP16-201ENST00000334352 RPE65Q16518 533 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 SIRPB2Q5JXA9 342 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 CCDC70Q6NSX1 233 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 RASGRP3Q8IV61 690 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 RNF10Q8N5U6 811 aaKnown RBP6.26□□□□□ -1.41
USP16-201ENST00000334352 LPCAT1Q8NF37 534 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 PROKR1Q8TCW9 393 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 HTR3CQ8WXA8 447 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 BARD1Q99728 777 aaKnown RBP6.26□□□□□ -1.41
USP16-201ENST00000334352 CUEDC1Q9NWM3 386 aaPredicted RBP6.26□□□□□ -1.41
USP16-201ENST00000334352 GOLGA6AQ9NYA3 693 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 SIRPGQ9P1W8 387 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 POLG2Q9UHN1 485 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 DDAH2O95865 285 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 BRAFP15056 766 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 POLD2P49005 469 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 POLE2P56282 527 aa6.26□□□□□ -1.41
USP16-201ENST00000334352 TUBB4BP68371 445 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms