RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 CCM2LQ9NUG4 571 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 POLR3BQ9NW08 1133 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 SMPD3Q9NY59 655 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 PCDH10Q9P2E7 1040 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 LEF1Q9UJU2 399 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 AGO1Q9UL18 857 aaKnown RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 RAI2Q9Y5P3 530 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UPK3BL1B0FP48 263 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UPK3BL2E5RIL1 263 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 TOR1BO14657 336 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 SEC22BO75396 215 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 ATXN1LP0C7T5 689 aaKnown RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 MTHFD2P13995 350 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UGT1A1P22309 533 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UGT1A4P22310 534 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UGT1A3P35503 534 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 UGT1A5P35504 534 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 GNA12Q03113 381 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 PMS2P3Q13401 168 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 SERINC3Q13530 473 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 DGCR6Q14129 220 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 FGD3Q5JSP0 725 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 RNF219Q5W0B1 726 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 GALNT5Q7Z7M9 940 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 TRPV3Q8NET8 790 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 GPR62Q9BZJ7 368 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 AASSQ9UDR5 926 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 CD300AQ9UGN4 299 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 TMCO1Q9UM00 188 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 GABRQQ9UN88 632 aa11.69□□□□□ -0.54
EFCAB13-201ENST00000331493 PABPN1LA6NDY0 278 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 DUSP11O75319 330 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 GJB5O95377 273 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ZNF682O95780 498 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 AASDHQ4L235 1098 aaPredicted RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 LRRC73Q5JTD7 316 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ANGPTL8Q6UXH0 198 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 UTS2BQ765I0 119 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ISOC1Q96CN7 298 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 BDH2Q9BUT1 245 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 DUS2Q9NX74 493 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 TNS1Q9HBL0 1735 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 A0A0J9YVX5 310 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 TNFRSF10BO14763 440 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 FDXRP22570 491 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 IL10RBQ08334 325 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 PGS1Q32NB8 556 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 GRAMD4Q6IC98 578 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 PHACTR4Q8IZ21 702 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 NCSTNQ92542 709 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ITCHQ96J02 903 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 RPF2Q9H7B2 306 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 LPOP22079 712 aaPredicted RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 MTHFRP42898 656 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 RHOAP61586 193 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 TMTC4Q5T4D3 741 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 PPP4R4Q6NUP7 873 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 KLHL35Q6PF15 583 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 TRPV1Q8NER1 839 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 IPPKQ9H8X2 491 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 ACTR3BQ9P1U1 418 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 VPS4AQ9UN37 437 aa11.68□□□□□ -0.54
EFCAB13-201ENST00000331493 A0A1W2PP18 115 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 SLC11A2P49281 568 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 ZNF33AQ06730 810 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 SELPLGQ14242 412 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 UGT3A2Q3SY77 523 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 NHSL2Q5HYW2 709 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 OGFOD2Q6N063 350 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 PRMT9Q6P2P2 845 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 CARM1Q86X55 608 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 GAB3Q8WWW8 586 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 SGCDQ92629 289 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 CLPBQ9H078 707 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 TMEM248Q9NWD8 314 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 SBF1O95248 1867 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 KERAO60938 352 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 NUP107P57740 925 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 BNIP2Q12982 314 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 ITGADQ13349 1161 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 FAM174BQ3ZCQ3 159 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 C6orf136Q5SQH8 315 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
EFCAB13-201ENST00000331493 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms