RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CDYL2Q8N8U2 506 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 OR2T11Q8NH01 316 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 SLCO4A1Q96BD0 722 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GPATCH1Q9BRR8 931 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 C1orf50Q9BV19 199 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 C2orf49Q9BVC5 232 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 MRPL17Q9NRX2 175 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 ASB3Q9Y575 518 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GPR45Q9Y5Y3 372 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 FXYD1O00168 92 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 NME4O00746 187 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 OR4F21O95013 312 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 MATN4O95460 622 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 UROSP10746 265 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 CCL5P13501 91 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 IDO1P14902 403 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GJA1P17302 382 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 ARL1P40616 181 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 SEMG2Q02383 582 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 TRAP1Q12931 704 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GPRIN3Q6ZVF9 776 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 SERPINA9Q86WD7 417 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 TMEM126BQ8IUX1 230 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 HS6ST3Q8IZP7 471 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 STK40Q8N2I9 435 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 CLDN19Q8N6F1 224 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 ADCY4Q8NFM4 1077 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 OR56A4Q8NGH8 313 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 LKAAEAR1Q8TD35 194 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 CIPCQ9C0C6 399 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 ZFYVE1Q9HBF4 777 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 CFAP97Q9P2B7 532 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 PCDHGB4Q9UN71 923 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 ATP11BQ9Y2G3 1177 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 NDUFAF1Q9Y375 327 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 DHRS7Q9Y394 339 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 PCDHGB5Q9Y5G0 923 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 DOCK6Q96HP0 2047 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 GIPC1O14908 333 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 CLDN7O95471 211 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 CYBBP04839 570 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 APLP1P51693 650 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 BCL2L1Q07817 233 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 XKR7Q5GH72 579 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 PTRHD1Q6GMV3 140 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 RETSATQ6NUM9 610 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 FRA10AC1Q70Z53 315 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 LRTOMTQ8WZ04 291 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 VPS33AQ96AX1 596 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 PIDD1Q9HB75 910 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 RC3H2Q9HBD1 1191 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 SPATS2LQ9NUQ6 558 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 PRSS21Q9Y6M0 314 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 PIKFYVEQ9Y2I7 2098 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 C15orf38-AP3S2A0A0A6YYH1 394 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 KIF1CO43896 1103 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 VPS4BO75351 444 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 CHEK2O96017 543 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 PRR35P0CG20 571 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT1A6P19224 532 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 ATP6V1B2P21281 511 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT1A1P22309 533 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT1A4P22310 534 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 CD70P32970 193 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT1A3P35503 534 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT1A5P35504 534 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 MNX1P50219 401 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 LMAN2Q12907 356 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 BLOC1S3Q6QNY0 202 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UGT2A3Q6UWM9 527 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 ARPINQ7Z6K5 226 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 DDX53Q86TM3 631 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 DHFR2Q86XF0 187 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 APLFQ8IW19 511 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 FAM110BQ8TC76 370 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 RPL10LQ96L21 214 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 HBEGFQ99075 208 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 NUSAP1Q9BXS6 441 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 CLPBQ9H078 707 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 ASB8Q9H765 288 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 NOL11Q9H8H0 719 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 IL26Q9NPH9 171 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC52A3Q9NQ40 469 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 UBAP1Q9NZ09 502 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 TBX21Q9UL17 535 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 AP4B1Q9Y6B7 739 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 COMMD10Q9Y6G5 202 aa14.69□□□□□ -0.06
CLCNKA-201ENST00000331433 TCRBV3S1A0A5B6 114 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 EME2A4GXA9 379 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 GOLGA8CPA6NN73 597 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ZNF839A8K0R7 811 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 TRBC1P01850 177 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 HNF1BP35680 557 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 GRIA3P42263 894 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 ERVPABLB-1P60509 514 aa14.68□□□□□ -0.06
CLCNKA-201ENST00000331433 CDKL1Q00532 357 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms