RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 HOXD9P28356 352 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 STX1BP61266 288 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 MAD2L1Q13257 205 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CDKN3Q16667 212 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 AGKQ53H12 422 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 SULF1Q8IWU6 871 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 STK40Q8N2I9 435 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 IL17RCQ8NAC3 791 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 KLHDC9Q8NEP7 349 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 OR10T2Q8NGX3 314 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 SOCS4Q8WXH5 440 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 VOPP1Q96AW1 172 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 C11orf24Q96F05 449 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 ZNF512Q96ME7 567 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 OSMRQ99650 979 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CHST8Q9H2A9 424 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 RGS18Q9NS28 235 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 SH3GLB1Q9Y371 365 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 PCDHGB3Q9Y5G1 929 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 NUP210LQ5VU65 1888 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 KCNE1BA0A087WTH5 132 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 GPR182O15218 404 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 DUSP11O75319 330 aaKnown RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 ALOX5P09917 674 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 ENO3P13929 434 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 EFNA1P20827 205 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CLCN7P51798 805 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CLCQ05315 142 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 FRA10AC1Q70Z53 315 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 TRMT1LQ7Z2T5 733 aaKnown RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 S100ZQ8WXG8 99 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CASP10Q92851 521 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 HDAC10Q969S8 669 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 RHBDF1Q96CC6 855 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 BDH2Q9BUT1 245 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 GABARAPL3Q9BY60 117 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 TMLHEQ9NVH6 421 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 PSME2Q9UL46 239 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 OR6C75A6NL08 312 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 CLDN24A6NM45 220 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 H3BMM5 538 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 SMAD6O43541 496 aaKnown RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 ARSFP54793 590 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 RUNDC3AQ59EK9 446 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 ZNF789Q5FWF6 425 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 UBE2UQ5VVX9 321 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 TTC23Q5W5X9 447 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 TRAF4Q9BUZ4 470 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 YIPF2Q9BWQ6 316 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPNE8-201ENST00000331366 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 NPAP1Q9NZP6 1156 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 OARD1Q9Y530 152 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 IGLV3-16A0A075B6K0 115 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ISPDA4D126 451 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ADM5C9JUS6 153 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CD3EAPO15446 510 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CLOCKO15516 846 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ATE1O95260 518 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ESR1P03372 595 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 GMPRP36959 345 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 SLC5A3P53794 718 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ESRRGP62508 458 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CTBP1Q13363 440 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 PMS2P3Q13401 168 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 MTM1Q13496 603 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CTF1Q16619 201 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 IQCCQ4KMZ1 466 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 AGAP7PQ5VUJ5 663 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 SPATA22Q8NHS9 363 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 BRI3BPQ8WY22 251 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CCDC124Q96CT7 223 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 RBM22Q9NW64 420 aaKnown RBP eCLIP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 THG1LQ9NWX6 298 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 NUP205Q92621 2012 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 PDHXO00330 501 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 PIP5K1BO14986 540 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 UGDHO60701 494 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 SNX4O95219 450 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 PRLP01236 227 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CHRNA1P02708 482 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CLCNKBP51801 687 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ISL1P61371 349 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 LRRC74AQ0VAA2 488 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 CTSL3PQ5NE16 218 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 BROXQ5VW32 411 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 TLK2Q86UE8 772 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 METTL23Q86XA0 190 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 ZNF583Q96ND8 569 aa8.69□□□□□ -1.02
CPNE8-201ENST00000331366 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
CPNE8-201ENST00000331366 POLR1EQ9GZS1 481 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms