RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PIH1D2Q8WWB5 315 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 EME1Q96AY2 570 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CCDC97Q96F63 343 aaPredicted RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 HERC2P3Q9BVR0 1158 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 GID8Q9NWU2 228 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CMTM6Q9NX76 183 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 DHRS7Q9Y394 339 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 SLC30A1Q9Y6M5 507 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ZNF106Q9H2Y7 1883 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 PRRG1O14668 218 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 PRMT5O14744 637 aaPredicted RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 OR4F21O95013 312 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 PGLSO95336 258 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 HSD17B1P14061 328 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ATN1P54259 1190 aaPredicted RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 AP1S1P61966 158 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CDH18Q13634 790 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 RAB33AQ14088 237 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 GK3PQ14409 553 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CAPRIN1Q14444 709 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 ARMC12Q5T9G4 340 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 OR2T11Q8NH01 316 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 TSPEARQ8WU66 669 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.41□□□□□ -0.1
TPM3-206ENST00000330188 ZUFSPQ96AP4 578 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 LRRC58Q96CX6 371 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 PDLIM5Q96HC4 596 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 TEX37Q96LM6 180 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CNBD2Q96M20 576 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ZNF382Q96SR6 550 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ACOX2Q99424 681 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 TM6SF2Q9BZW4 377 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 BRINP2Q9C0B6 783 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 COQ10BQ9H8M1 238 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 NUDT4Q9NZJ9 180 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 AK5Q9Y6K8 562 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 KIAA1671Q9BY89 1806 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 TYW5A2RUC4 315 aaKnown RBP14.4□□□□□ -0.1
TPM3-206ENST00000330188 ASPDHA6ND91 283 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 H0YJX3 145 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 GAPDHSO14556 408 aaPredicted RBP14.4□□□□□ -0.1
TPM3-206ENST00000330188 STAMBPO95630 424 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 BMP1P13497 986 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 SLC6A2P23975 617 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 CA5AP35218 305 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 GRIA3P42263 894 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 FOXM1Q08050 763 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 GRIK2Q13002 908 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 RCAN2Q14206 197 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 MTX3Q5HYI7 312 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 TXNDC8Q6A555 127 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 CAMK1DQ8IU85 385 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 APCDD1Q8J025 514 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 SLC39A11Q8N1S5 342 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 OR52B6Q8NGF0 335 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 BHMTQ93088 406 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 SLC2A11Q9BYW1 496 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 PCDHB1Q9Y5F3 818 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 SNX13Q9Y5W8 968 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 CPQQ9Y646 472 aa14.4□□□□□ -0.1
TPM3-206ENST00000330188 A0A1W2PP18 115 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 C7orf72A4D263 438 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 GIPC1O14908 333 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 SMAD6O43541 496 aaKnown RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 OLFM2O95897 454 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 APLP1P51693 650 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 CERS6Q6ZMG9 384 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 AMIGO2Q86SJ2 522 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 FAM217AQ8IXS0 508 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 DCBLD1Q8N8Z6 715 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 OR6K2Q8NGY2 324 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 GRIN3AQ8TCU5 1115 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 CANT1Q8WVQ1 401 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 AUTS2Q8WXX7 1259 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 TMEM169Q96HH4 297 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ZNF597Q96LX8 424 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 EFHD1Q9BUP0 239 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 SPATA16Q9BXB7 569 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 IL21Q9HBE4 155 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ARMC1Q9NVT9 282 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 PCDHA9Q9Y5H5 950 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 INSL5Q9Y5Q6 135 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 TIPRLO75663 272 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 MYCP01106 439 aaPredicted RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 PABPC4LP0CB38 370 aaKnown RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 EPHB3P54753 998 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 KCNK10P57789 538 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 UFM1P61960 85 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ERVK-8P63133 956 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 IKBKEQ14164 716 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 NRF1Q16656 503 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 C18orf21Q32NC0 220 aaPredicted RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 PDCD4Q53EL6 469 aaKnown RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 LETMD1Q6P1Q0 360 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms