RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ATP5C1P36542 298 aaKnown RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC11A2P49281 568 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SUOXP51687 545 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SGSHP51688 502 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 MAPK10P53779 464 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF177Q13360 481 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SGO1Q5FBB7 561 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 RTP2Q5QGT7 225 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ANKRD60Q9BZ19 345 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ESRRBO95718 433 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 HTR6P50406 440 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 HK3P52790 923 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 DGKQP52824 942 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 MTPNP58546 118 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 NR6A1Q15406 480 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 TYSND1Q2T9J0 566 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 NKAPQ8N5F7 415 aaKnown RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 TRPV3Q8NET8 790 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 TRIB3Q96RU7 358 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 C9orf16Q9BUW7 83 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 PDFQ9HBH1 243 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ABCD2Q9UBJ2 740 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ANAPC2Q9UJX6 822 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 MYO16Q9Y6X6 1858 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 A8MX80 341 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 H0YJX3 145 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 HSD17B1P14061 328 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 MAGEA11P43364 429 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 TAF1AQ15573 450 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ATP6AP1LQ52LC2 224 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 RNF219Q5W0B1 726 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 NANOGP8Q6NSW7 305 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 GPR141Q7Z602 305 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ZBTB46Q86UZ6 589 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 KIAA2013Q8IYS2 634 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 FATE1Q969F0 183 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 DTNBP1Q96EV8 351 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 MGME1Q9BQP7 344 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 NANOGQ9H9S0 305 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 AGPAT4Q9NRZ5 378 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 AIG1Q9NVV5 245 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC8A2Q9UPR5 921 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 OAS3Q9Y6K5 1087 aaKnown RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 ASPDHA6ND91 283 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 MYCP01106 439 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 PRLP01236 227 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 CAPN1P07384 714 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 UROSP10746 265 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 LCN8Q6JVE9 175 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 DNAJC14Q6Y2X3 702 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 BIRC8Q96P09 236 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 APOL5Q9BWW9 433 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 MAGEH1Q9H213 219 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 POPDC3Q9HBV1 291 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 EVLQ9UI08 416 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 LEF1Q9UJU2 399 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 DNMT3LQ9UJW3 386 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 PCDHB9Q9Y5E1 797 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 PCDHA9Q9Y5H5 950 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 FFAR3O14843 346 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 GPR42O15529 346 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 MATN4O95460 622 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 NFKBIAP25963 317 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 IL12AP29459 219 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 GGT5P36269 586 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 OR4D2P58180 307 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 C6orf136Q5SQH8 315 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 TMEM214Q6NUQ4 689 aaKnown RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 SPATA19Q7Z5L4 167 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 DBF4BQ8NFT6 615 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 ABTB1Q969K4 478 aaPredicted RBP13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 GPR63Q9BZJ6 419 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 PREBQ9HCU5 417 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 RIC8BQ9NVN3 520 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 ADAM12O43184 909 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 VPS4BO75351 444 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 MLYCDO95822 493 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 LDLRP01130 860 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CDK4P11802 303 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 GALK1P51570 392 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 KPNA1P52294 538 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 ERVPABLB-1P60509 514 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TMED1Q13445 227 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 DHRSXQ8N5I4 330 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms