RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPATA6Q9NWH7 488 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 TAS2R13Q9NYV9 303 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 OAS3Q9Y6K5 1087 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 A0A087X1B8 175 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 QSOX1O00391 747 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 COPEO14579 308 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 AXIN1O15169 862 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 NIPSNAP2O75323 286 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 SPAG7O75391 227 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 MTX2O75431 263 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 WISP3O95389 354 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 C2P06681 752 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 ATP1B2P14415 290 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 TRIM23P36406 574 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 NUDT1P36639 197 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PXNP49023 591 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 CDK3Q00526 305 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 ZNF460Q14592 562 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PPM1JQ5JR12 505 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 KDM7AQ6ZMT4 941 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PIM3Q86V86 326 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 CLDN19Q8N6F1 224 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PCED1AQ9H1Q7 454 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 VPS11Q9H270 941 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 C6orf106Q9H6K1 298 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 WDR26Q9H7D7 661 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 TLK1Q9UKI8 766 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PIKFYVEQ9Y2I7 2098 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM120BA0PK00 339 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 E5RI56 91 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 F8W8V4 182 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC31A1O15431 190 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 IGHV4-34P06331 123 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 GSTA1P08263 222 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 OR56A5P0C7T3 313 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 HNRNPA2B1P22626 353 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC18A1P54219 525 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 PDAP1Q13442 181 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 ZNF648Q5T619 568 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 CLEC14AQ86T13 490 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 LCA5Q86VQ0 697 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 ARFGAP2Q8N6H7 521 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 LKAAEAR1Q8TD35 194 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 RLN3Q8WXF3 142 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 SPACA7Q96KW9 195 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR21Q99679 349 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR174Q9BXC1 333 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM126AQ9BYI3 521 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 CNOT10Q9H9A5 744 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 KCNK9Q9NPC2 374 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 TRMT6Q9UJA5 497 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 DMTF1Q9Y222 760 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 ACOT9Q9Y305 439 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 EML5Q05BV3 1969 aa10.12□□□□□ -0.79
VIPAS39-201ENST00000327028 TTC28Q96AY4 2481 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 VEGFDO43915 354 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 GLRA3O75311 464 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 COL6A2P12110 1019 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 AKT2P31751 481 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CRHR1P34998 444 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC26A3P40879 764 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 PGGT1BP53609 377 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 IRF9Q00978 393 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 INPP5AQ14642 412 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 UGT3A1Q6NUS8 523 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 DET1Q7L5Y6 550 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 ADGRG6Q86SQ4 1221 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TRIM74Q86UV6 250 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 GIMAP7Q8NHV1 300 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CD200R1Q8TD46 325 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 PANX3Q96QZ0 392 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TSSK1BQ9BXA7 367 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC13A1Q9BZW2 595 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 GPAMQ9HCL2 828 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TRIM39Q9HCM9 518 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 FZD3Q9NPG1 666 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 PHPT1Q9NRX4 125 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 DCDC2Q9UHG0 476 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 SGTAO43765 313 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 MYCLP1P12525 358 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TDGF1P13385 188 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 ZNF37AP17032 561 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CHRM3P20309 590 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 SKIV2L2P42285 1042 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 PRLHRP49683 370 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CLCN7P51798 805 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM115Q12893 351 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 INSCQ1MX18 579 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 TBC1D1Q86TI0 1168 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 CENPLQ8N0S6 344 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 RASGEF1AQ8N9B8 481 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 NAT14Q8WUY8 206 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 EPHX3Q9H6B9 360 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 KLHL42Q9P2K6 505 aa10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 ATXN10Q9UBB4 475 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms