RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 IL22Q9GZX6 179 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 KAT8Q9H7Z6 458 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 DNM1LO00429 736 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 CCL23P55773 120 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SMARCD3Q6STE5 483 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ASB18Q6ZVZ8 466 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 AGBL3Q8NEM8 1001 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 METTL8Q9H825 291 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 SLC28A1O00337 649 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 FESP07332 822 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 C4orf46Q504U0 113 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 CCNYL2Q5T2Q4 361 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SLC27A1Q6PCB7 646 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 TECPR2O15040 1411 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 GJB1P08034 283 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 UGT8Q16880 541 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 FRRS1Q6ZNA5 592 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 PDPRQ8NCN5 879 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 NDRG1Q92597 394 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 BARD1Q99728 777 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 CDH22Q9UJ99 828 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 A0A0A0MRY4 1105 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 FABP12A6NFH5 140 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MAGEB3O15480 346 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ENPEPQ07075 957 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ILDR1Q86SU0 546 aaPredicted RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 OR5T3Q8NGG3 340 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 SPATA13Q96N96 652 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 TBX5Q99593 518 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ABCG4Q9H172 646 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 TNPO3Q9Y5L0 923 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 SERPINB7O75635 380 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 UGT2B17O75795 530 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ATF6P18850 670 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MANFP55145 182 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 FAM156AQ8NDB6 213 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 DNASE1L2Q92874 299 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 P2RX7Q99572 595 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 NCANO14594 1321 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 ANGPTL1O95841 491 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 MTFR2Q6P444 385 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RHBDF2Q6PJF5 856 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 CHERPQ8IWX8 916 aaKnown RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 KLHL5Q96PQ7 755 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 TTLL2Q9BWV7 592 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RNF208Q9H0X6 261 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RABL2AQ9UBK7 228 aaPredicted RBP7.85□□□□□ -1.15
CIITA-201ENST00000324288 CKLFQ9UBR5 152 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 RAB26Q9ULW5 256 aa7.85□□□□□ -1.15
CIITA-201ENST00000324288 CLDN25C9JDP6 229 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TNFRSF11BO00300 401 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 GNALP38405 381 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 GTF3C1Q12789 2109 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 FAPQ12884 760 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 ZNF268Q14587 947 aaPredicted RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 FASTKD3Q14CZ7 662 aaKnown RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 ANKRD23Q86SG2 305 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 STK40Q8N2I9 435 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 C12orf29Q8N999 325 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 GMCL1P1Q8NEA9 526 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 COQ8AQ8NI60 647 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 STAG3L4Q8TBR4 150 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 NODALQ96S42 347 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBCBQ99426 244 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TRIM2Q9C040 744 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 BRINP2Q9C0B6 783 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 DNMT3LQ9UJW3 386 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 ADAM28Q9UKQ2 775 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 ZC3H13Q5T200 1668 aaKnown RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 DOCK8Q8NF50 2099 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 SMIM30A4D0T7 59 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 UGT2B11O75310 529 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 RASGRP1O95267 797 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 APOC1P02654 83 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 FOSL1P15407 271 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 ZNF12P17014 697 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 UQCRC1P31930 480 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 ELAVL2Q12926 359 aaKnown RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 ZNF248Q8NDW4 579 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 DNAJA4Q8WW22 397 aaPredicted RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 MRPL17Q9NRX2 175 aaKnown RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 PDE10AQ9Y233 779 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3DA0A087WVF3 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3IA0A087WXS9 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3EA0A087X179 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3KA0A087X1G2 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 KANTRA0A1W2PQU2 76 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3FA6NER0 549 aaPredicted RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3LB9A6J9 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 MAGEC1O60732 1142 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3HP0C7X1 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3GQ6DHY5 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3CQ6IPX1 549 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 WDR59Q6PJI9 974 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 FAM92BQ6ZTR7 304 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 TBC1D3Q8IZP1 549 aaPredicted RBP7.84□□□□□ -1.15
CIITA-201ENST00000324288 TEX19Q8NA77 164 aa7.84□□□□□ -1.15
CIITA-201ENST00000324288 OR2T12Q8NG77 320 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms