RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 MDGA1Q8NFP4 955 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 TMEM74Q96NL1 305 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 E7ENX8 843 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 LEFTY2O00292 366 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 XYLBO75191 536 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 PRAMEF12O95522 483 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 TYRP14679 529 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 CKMT2P17540 419 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 IGFBP4P22692 258 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 DGKAP23743 735 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 ARRB2P32121 409 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 RPIAP49247 311 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 KRT72Q14CN4 511 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 LRRC66Q68CR7 880 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 OR52B6Q8NGF0 335 aa13.48□□□□□ -0.25
SRRM1-201ENST00000323848 ATXN2Q99700 1313 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SAP18O00422 153 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 FKBP6O75344 327 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MYOGP15173 224 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SEC13P55735 322 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MSLNQ13421 630 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SEMA3AQ14563 771 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 RNF220Q5VTB9 566 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 KDELC1Q6UW63 502 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 RBFAQ8N0V3 343 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 NUDT8Q8WV74 236 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 TMEM79Q9BSE2 394 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SEC16AO15027 2179 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 PFDN1O60925 122 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 GBAP04062 536 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 ATP5BP06576 529 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 ZNF37AP17032 561 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 PSMA4P25789 261 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 LBX1P52954 281 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MTPNP58546 118 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SMARCB1Q12824 385 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 CACHD1Q5VU97 1274 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 EPGNQ6UW88 154 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 PARP8Q8N3A8 854 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 ARRDC2Q8TBH0 407 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MCOLN3Q8TDD5 553 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 DNAJC28Q9NX36 388 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 EPHX1P07099 455 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 ANXA5P08758 320 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 VCLP18206 1134 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 AQP4P55087 323 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SULT2A1Q06520 285 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 C2orf27AQ580R0 203 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 KCTD11Q693B1 232 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 MAGEE2Q8TD90 523 aaPredicted RBP13.47□□□□□ -0.25
SRRM1-201ENST00000323848 PLD4Q96BZ4 506 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 AP4S1Q9Y587 144 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 SNX8Q9Y5X2 465 aa13.47□□□□□ -0.25
SRRM1-201ENST00000323848 LDB2O43679 373 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 KDELR3O43731 214 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 MAGEA3P43357 314 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 RFX3P48380 749 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 NAE1Q13564 534 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 IRF5Q13568 498 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 PLEKHG6Q3KR16 790 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 ADGRG2Q8IZP9 1017 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 ZNF570Q96NI8 536 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 SCHIP1Q9P0W5 487 aaPredicted RBP13.46□□□□□ -0.25
SRRM1-201ENST00000323848 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 WASH3PC4AMC7 463 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 COL6A2P12110 1019 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 HNF1BP35680 557 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 GPR1P46091 355 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 RABL3Q5HYI8 236 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 BHLHA9Q7RTU4 235 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 STK32CQ86UX6 486 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 RDH11Q8TC12 318 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 PTCD2Q8WV60 388 aaKnown RBP13.46□□□□□ -0.25
SRRM1-201ENST00000323848 SUSD6Q92537 303 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 KCNN1Q92952 543 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 AARSD1Q9BTE6 412 aaKnown RBP13.46□□□□□ -0.25
SRRM1-201ENST00000323848 S100A14Q9HCY8 104 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 SPAG4Q9NPE6 437 aa13.46□□□□□ -0.25
SRRM1-201ENST00000323848 ZNF490Q9ULM2 529 aaPredicted RBP13.46□□□□□ -0.25
SRRM1-201ENST00000323848 KLF11O14901 512 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 MYO1DO94832 1006 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms