RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CLCN2P51788 898 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 MS4A2Q01362 244 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 FOXM1Q08050 763 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 DUSP4Q13115 394 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 DAG1Q14118 895 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TRIP4Q15650 581 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 RSBN1Q5VWQ0 802 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ANKLE1Q8NAG6 615 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 KBTBD7Q8WVZ9 684 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 STARD7Q9NQZ5 370 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 MTMR10Q9NXD2 777 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 IFT80Q9P2H3 777 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TLR6Q9Y2C9 796 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 KERAO60938 352 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF37AP17032 561 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TECRLQ5HYJ1 363 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ANKRD23Q86SG2 305 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 WDR83Q9BRX9 315 aaKnown RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TUBA8Q9NY65 449 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 HS3ST4Q9Y661 456 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 BCKDKO14874 412 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 INSIG1O15503 277 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 LRG1P02750 347 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ESR1P03372 595 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 CCDC159P0C7I6 412 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 DBTP11182 482 aaKnown RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF678Q5SXM1 525 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 SAPCD2Q86UD0 394 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 POC5Q8NA72 575 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 KDM1BQ8NB78 822 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 GALPQ9UBC7 116 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 FKBPLQ9UIM3 349 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TTC24A2A3L6 582 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CLDN25C9JDP6 229 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GRID2O43424 1007 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 UGT2B11O75310 529 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 SLC25A14O95258 325 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 PAPSS2O95340 614 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 IGFBP5P24593 272 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 YAP1P46937 504 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 UBE3AQ05086 875 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 SOX4Q06945 474 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GALNT5Q7Z7M9 940 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 NPWQ8N729 165 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 NELL1Q92832 810 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 C12orf43Q96C57 262 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 TRNAU1APQ9NX07 287 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 H2AFY2Q9P0M6 372 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GIMAP2Q9UG22 337 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 IKZF3Q9UKT9 509 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 C9IYK1 514 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 STK16O75716 305 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 ALOX15P16050 662 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 PBLDP30039 288 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 HOXA11P31270 313 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CPOXP36551 454 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CCR3P51677 355 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GJA9P57773 515 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 PLD1Q13393 1074 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GTF2H2Q13888 395 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 STARD3Q14849 445 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CCDC142Q17RM4 750 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 LYPLAL1Q5VWZ2 237 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 GTF2H2CQ6P1K8 395 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CYP4Z1Q86W10 505 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 SIDT2Q8NBJ9 832 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 SLC13A3Q8WWT9 602 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 SMOC2Q9H3U7 446 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 TDRKHQ9Y2W6 561 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 H0YJX3 145 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 ECI2O75521 394 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 HPCAL1P37235 193 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 ATP4BP51164 291 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 PFKPQ01813 784 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 MRPL28Q13084 256 aaKnown RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 CAMK2GQ13555 558 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-201ENST00000323668 RABL3Q5HYI8 236 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 PGM2L1Q6PCE3 622 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 ANKS3Q6ZW76 656 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 USP45Q70EL2 814 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 HEATR4Q86WZ0 1026 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 MYDGFQ969H8 173 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 HSPBAP1Q96EW2 488 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 COPS8Q99627 209 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 DNAJB9Q9UBS3 223 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 KCTD3Q9Y597 815 aa14.6□□□□□ -0.07
TCOF1-201ENST00000323668 FAM174BQ3ZCQ3 159 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 TRAF7Q6Q0C0 670 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 SVOPLQ8N434 492 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 DRAXINQ8NBI3 349 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 MRPL9Q9BYD2 267 aaKnown RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ATP13A3Q9H7F0 1226 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 COQ6Q9Y2Z9 468 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 SNTNA6NMZ2 147 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 TBL1XO60907 577 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CATP04040 527 aaKnown RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 URODP06132 367 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ALOX5P09917 674 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms